RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 GOLGA6L10A0A0M3HER8 536 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 NEMP2A6NFY4 417 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 ANKRD65E5RJM6 399 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 FXYD1O00168 92 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 SYN3O14994 580 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 PRICKLE3O43900 615 aaPredicted RBP5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 TAC1P20366 129 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 WEE1P30291 646 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 PRMT2P55345 433 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 YWHAHQ04917 246 aaPredicted RBP5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 STILQ15468 1287 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 TEAD2Q15562 447 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 MAP9Q49MG5 647 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 NRROSQ86YC3 692 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 C7orf61Q8IZ16 206 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 OR13C4Q8NGS5 318 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 EXOC2Q96KP1 924 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 NOX5Q96PH1 765 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 PARVAQ9NVD7 372 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 HAO1Q9UJM8 370 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 PLA2G4CQ9UP65 541 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 A0A1W2PPV9 198 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 CABYRO75952 493 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 SRCP12931 536 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 HTR4Q13639 388 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 PPP2R5DQ14738 602 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 SIRPB2Q5JXA9 342 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 SBSNQ6UWP8 590 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 SUV39H2Q9H5I1 410 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 ZFP37Q9Y6Q3 630 aaPredicted RBP5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 ARHGAP21Q5T5U3 1957 aa5.72□□□□□ -1.49
TOPBP1-201ENST00000260810 ABHD14A-ACY1A0A1B0GW23 586 aa5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 TSPAN11A1L157 253 aa5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 PRAMEF11O60813 436 aa5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 ZIC2O95409 532 aaPredicted RBP5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 WNT1P04628 370 aa5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 PIRTP0C851 137 aa5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 DRD4P21917 467 aa5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 TBXAS1P24557 533 aaPredicted RBP5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 ABL2P42684 1182 aa5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 TUBP50607 506 aa5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 SLC14A1Q13336 389 aa5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 MLF2Q15773 248 aaPredicted RBP5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 SEPT7Q16181 437 aaKnown RBP5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 LONRF1Q17RB8 773 aa5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 ANKRD20A2Q5SQ80 823 aa5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 ANKRD20A1Q5TYW2 823 aa5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 ANKRD20A3Q5VUR7 823 aa5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 HS2ST1Q7LGA3 356 aa5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 GRASPQ7Z6J2 395 aaPredicted RBP5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 ZC3H18Q86VM9 953 aaKnown RBP5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 SLC22A15Q8IZD6 547 aa5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 OR2T11Q8NH01 316 aa5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 NTNG2Q96CW9 530 aa5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 RPL10LQ96L21 214 aaKnown RBP5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 HEXIM2Q96MH2 286 aaKnown RBP5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 PHOX2BQ99453 314 aa5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 MARK1Q9P0L2 795 aa5.71□□□□□ -1.49
TOPBP1-201ENST00000260810 GRID2O43424 1007 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 S1PR4O95977 384 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 RHOP08100 348 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 PRR35P0CG20 571 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 ITGAXP20702 1163 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 RPA3P35244 121 aaPredicted RBP5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 USP8P40818 1118 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 SMTNP53814 917 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 TERF2Q15554 542 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 FSTL4Q6MZW2 842 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 CMC1Q7Z7K0 106 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 SYCP3Q8IZU3 236 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 SPATA6LQ8N4H0 392 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 XPO6Q96QU8 1125 aaKnown RBP5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 FAM107BQ9H098 131 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 MYLK2Q9H1R3 596 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 TPX2Q9ULW0 747 aaKnown RBP5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 VWA7Q9Y334 891 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 CACNA1CQ13936 2221 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 KCNE1BA0A087WTH5 132 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 PMS2P1A4D2B8 440 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 WASHC1A8K0Z3 465 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 M0QYT0 321 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 ETHE1O95571 254 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 NAP1L1P55209 391 aaKnown RBP5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 OCRLQ01968 901 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 OR4D1Q15615 310 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 SGO2Q562F6 1265 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 WASH2PQ6VEQ5 465 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 MSRB3Q8IXL7 192 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 KIFC1Q9BW19 673 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 KATNAL1Q9BW62 490 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 VANGL2Q9ULK5 521 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 CHST2Q9Y4C5 530 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 ZSCAN12O43309 604 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 SCN2BO60939 215 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 TTC4O95801 387 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 RPL13P26373 211 aaKnown RBP5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 ELK3P41970 407 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 OR1G1P47890 313 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 PDX1P52945 283 aa5.71□□□□□ -1.5
TOPBP1-201ENST00000260810 GUCY1A3Q02108 690 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms