RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 MFSD7Q6UXD7 560 aa17.01■□□□□ 0.31
SDCBP-201ENST00000260130 SRLQ86TD4 932 aa17.01■□□□□ 0.31
SDCBP-201ENST00000260130 DCLK2Q8N568 766 aa17.01■□□□□ 0.31
SDCBP-201ENST00000260130 ATPAF2Q8N5M1 289 aa17.01■□□□□ 0.31
SDCBP-201ENST00000260130 RNF10Q8N5U6 811 aaKnown RBP17.01■□□□□ 0.31
SDCBP-201ENST00000260130 CADM4Q8NFZ8 388 aa17.01■□□□□ 0.31
SDCBP-201ENST00000260130 GRIN3AQ8TCU5 1115 aa17.01■□□□□ 0.31
SDCBP-201ENST00000260130 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.01■□□□□ 0.31
SDCBP-201ENST00000260130 AENQ8WTP8 325 aaKnown RBP17.01■□□□□ 0.31
SDCBP-201ENST00000260130 GDAP1L1Q96MZ0 367 aa17.01■□□□□ 0.31
SDCBP-201ENST00000260130 ZNF599Q96NL3 588 aa17.01■□□□□ 0.31
SDCBP-201ENST00000260130 OSBPL9Q96SU4 736 aa17.01■□□□□ 0.31
SDCBP-201ENST00000260130 FEZ2Q9UHY8 353 aaPredicted RBP17.01■□□□□ 0.31
SDCBP-201ENST00000260130 KPNA3O00505 521 aaPredicted RBP17■□□□□ 0.31
SDCBP-201ENST00000260130 POP4O95707 220 aaKnown RBP17■□□□□ 0.31
SDCBP-201ENST00000260130 PAFAH1B1P43034 410 aa17■□□□□ 0.31
SDCBP-201ENST00000260130 GBE1Q04446 702 aa17■□□□□ 0.31
SDCBP-201ENST00000260130 ZNF33AQ06730 810 aa17■□□□□ 0.31
SDCBP-201ENST00000260130 POM121L1PQ3SYA9 428 aa17■□□□□ 0.31
SDCBP-201ENST00000260130 ATXN7L2Q5T6C5 722 aaPredicted RBP17■□□□□ 0.31
SDCBP-201ENST00000260130 SLC9A4Q6AI14 798 aa17■□□□□ 0.31
SDCBP-201ENST00000260130 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17■□□□□ 0.31
SDCBP-201ENST00000260130 ARMCX6Q7L4S7 300 aa17■□□□□ 0.31
SDCBP-201ENST00000260130 RCOR2Q8IZ40 523 aa17■□□□□ 0.31
SDCBP-201ENST00000260130 SYCE1Q8N0S2 351 aa17■□□□□ 0.31
SDCBP-201ENST00000260130 OR6K2Q8NGY2 324 aa17■□□□□ 0.31
SDCBP-201ENST00000260130 KRT35Q92764 455 aa17■□□□□ 0.31
SDCBP-201ENST00000260130 FOXJ1Q92949 421 aa17■□□□□ 0.31
SDCBP-201ENST00000260130 ZBTB9Q96C00 473 aa17■□□□□ 0.31
SDCBP-201ENST00000260130 LRIG1Q96JA1 1093 aa17■□□□□ 0.31
SDCBP-201ENST00000260130 ARRDC1-AS1Q9H2J1 176 aa17■□□□□ 0.31
SDCBP-201ENST00000260130 ZDHHC6Q9H6R6 413 aa17■□□□□ 0.31
SDCBP-201ENST00000260130 LHX3Q9UBR4 397 aa17■□□□□ 0.31
SDCBP-201ENST00000260130 RRP15Q9Y3B9 282 aaKnown RBP17■□□□□ 0.31
SDCBP-201ENST00000260130 PCDHGA5Q9Y5G8 931 aa17■□□□□ 0.31
SDCBP-201ENST00000260130 PCDHA3Q9Y5H8 950 aa17■□□□□ 0.31
SDCBP-201ENST00000260130 NUP205Q92621 2012 aa17■□□□□ 0.31
SDCBP-201ENST00000260130 ABCA7Q8IZY2 2146 aa17■□□□□ 0.31
SDCBP-201ENST00000260130 GOLGA6BA6NDN3 693 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 MYO1CO00159 1063 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 KRIT1O00522 736 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 SEMA4FO95754 770 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 IGSF6O95976 241 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 CTNNA1P35221 906 aaKnown RBP16.99■□□□□ 0.31
SDCBP-201ENST00000260130 CDKN2BP42772 138 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 MARCKSL1P49006 195 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 CREB5Q02930 508 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 RAD51Q06609 339 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 GALNT2Q10471 571 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 TAZQ16635 292 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 LYSMD4Q5XG99 296 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 RFX6Q8HWS3 928 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 SLC41A1Q8IVJ1 513 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 SPATA4Q8NEY3 305 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 EXD1Q8NHP7 514 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 PLXND1Q9Y4D7 1925 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 RNF103O00237 685 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 MAP3K6O95382 1288 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 PEX11BO96011 259 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 MYBL2P10244 700 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 ZFXP17010 805 aaPredicted RBP16.99■□□□□ 0.31
SDCBP-201ENST00000260130 GKP32189 559 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 GARSP41250 739 aaKnown RBP16.99■□□□□ 0.31
SDCBP-201ENST00000260130 CNTN1Q12860 1018 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 SLC10A2Q12908 348 aaPredicted RBP16.99■□□□□ 0.31
SDCBP-201ENST00000260130 LBRQ14739 615 aaKnown RBP16.99■□□□□ 0.31
SDCBP-201ENST00000260130 TMCO4Q5TGY1 634 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 SPOCD1Q6ZMY3 1216 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 NT5DC3Q86UY8 548 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 PLD5Q8N7P1 536 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 TSEN2Q8NCE0 465 aaKnown RBP16.99■□□□□ 0.31
SDCBP-201ENST00000260130 FAM131CQ96AQ9 280 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 HSPA12BQ96MM6 686 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 CINPQ9BW66 212 aaPredicted RBP16.99■□□□□ 0.31
SDCBP-201ENST00000260130 PCED1AQ9H1Q7 454 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 DYRK4Q9NR20 520 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 DTLQ9NZJ0 730 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 AMFRQ9UKV5 643 aa16.99■□□□□ 0.31
SDCBP-201ENST00000260130 BCLAF3A2AJT9 711 aaKnown RBP16.98■□□□□ 0.31
SDCBP-201ENST00000260130 PLK4O00444 970 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 APOL1O14791 398 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 MX2P20592 715 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 SLC10A7Q0GE19 358 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 CCDC15Q0P6D6 951 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 CYP2U1Q7Z449 544 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 GSPT2Q8IYD1 628 aaKnown RBP16.98■□□□□ 0.31
SDCBP-201ENST00000260130 NSMCE1Q8WV22 266 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 ARRDC3Q96B67 414 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 PPP1R16AQ96I34 528 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 RBM41Q96IZ5 413 aaKnown RBP16.98■□□□□ 0.31
SDCBP-201ENST00000260130 EXOC2Q96KP1 924 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 RASSF4Q9H2L5 321 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 C6orf106Q9H6K1 298 aaPredicted RBP16.98■□□□□ 0.31
SDCBP-201ENST00000260130 RNF14Q9UBS8 474 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 SEPT3Q9UH03 358 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 EVLQ9UI08 416 aaPredicted RBP16.98■□□□□ 0.31
SDCBP-201ENST00000260130 HEY1Q9Y5J3 304 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 OTOGLQ3ZCN5 2332 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 FAM47DPA6NHR8 397 aa16.98■□□□□ 0.31
SDCBP-201ENST00000260130 METTL12A8MUP2 240 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms