RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 RHBDL2Q9NX52 303 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 FBXO5Q9UKT4 447 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 HEMK1Q9Y5R4 338 aaPredicted RBP13.65□□□□□ -0.22
VHL-201ENST00000256474 UBA6A0AVT1 1052 aaPredicted RBP13.65□□□□□ -0.22
VHL-201ENST00000256474 E7ENX8 843 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 TIPRLO75663 272 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 UGT1A6P19224 532 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 CES1P23141 567 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 CDKL1Q00532 357 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 PPIL2Q13356 520 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 CENPLQ8N0S6 344 aaPredicted RBP13.65□□□□□ -0.22
VHL-201ENST00000256474 LILRA2Q8N149 483 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 CASS4Q9NQ75 786 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 MIOSQ9NXC5 875 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 ABI2Q9NYB9 513 aaPredicted RBP13.65□□□□□ -0.22
VHL-201ENST00000256474 NCKIPSDQ9NZQ3 722 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 COMMD10Q9Y6G5 202 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 RLFQ13129 1914 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 SHROOM3Q8TF72 1996 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 DOCK1Q14185 1865 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 NR5A2O00482 541 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 PTGESO14684 152 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 CRCPO75575 148 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 CDH15P55291 814 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 PSME3P61289 254 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 PAFAH1B3Q15102 231 aaKnown RBP13.65□□□□□ -0.22
VHL-201ENST00000256474 CCL14Q16627 93 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 NADK2Q4G0N4 442 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 NEPROQ6NW34 567 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 ZYG11AQ6WRX3 759 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 KBTBD6Q86V97 674 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 ZMIZ2Q8NF64 920 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 BLOC1S5Q8TDH9 187 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 MAML3Q96JK9 1138 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 SIKE1Q9BRV8 207 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 MID2Q9UJV3 735 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 KCTD3Q9Y597 815 aa13.65□□□□□ -0.22
VHL-201ENST00000256474 RNASEH2AO75792 299 aaKnown RBP13.64□□□□□ -0.23
VHL-201ENST00000256474 THP07101 528 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 MYL4P12829 197 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 PLOD1Q02809 727 aaPredicted RBP13.64□□□□□ -0.23
VHL-201ENST00000256474 PPIDQ08752 370 aaKnown RBP13.64□□□□□ -0.23
VHL-201ENST00000256474 TMED1Q13445 227 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 ZNF792Q3KQV3 632 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 LINC01465Q8N7H1 131 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 GRIN3AQ8TCU5 1115 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 DRC3Q9H069 523 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 NOL11Q9H8H0 719 aaKnown RBP13.64□□□□□ -0.23
VHL-201ENST00000256474 DNAH14Q0VDD8 3507 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 UNC80Q8N2C7 3258 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 LRRC14BA6NHZ5 514 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 M0QZ92 97 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 UBDO15205 165 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 HNRNPRO43390 633 aaKnown RBP13.64□□□□□ -0.23
VHL-201ENST00000256474 CD151P48509 253 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 CAPRIN1Q14444 709 aaKnown RBP13.64□□□□□ -0.23
VHL-201ENST00000256474 LRRC23Q53EV4 343 aaPredicted RBP13.64□□□□□ -0.23
VHL-201ENST00000256474 CMPK2Q5EBM0 449 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 CIR1Q86X95 450 aaPredicted RBP13.64□□□□□ -0.23
VHL-201ENST00000256474 B4GALNT2Q8NHY0 566 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 DQX1Q8TE96 717 aaKnown RBP13.64□□□□□ -0.23
VHL-201ENST00000256474 ESAMQ96AP7 390 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 CCT7Q99832 543 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 SLC39A8Q9C0K1 460 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 STN1Q9H668 368 aaKnown RBP13.64□□□□□ -0.23
VHL-201ENST00000256474 TNFRSF12AQ9NP84 129 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 EIF2B3Q9NR50 452 aaKnown RBP13.64□□□□□ -0.23
VHL-201ENST00000256474 BTRCQ9Y297 605 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 RRN3P2A6NIE6 340 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 SCAMP3O14828 347 aaKnown RBP13.64□□□□□ -0.23
VHL-201ENST00000256474 CABYRO75952 493 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 CPB1P15086 417 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 NPY2RP49146 381 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 PGFP49763 221 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 NSUN2Q08J23 767 aaKnown RBP eCLIP13.64□□□□□ -0.23
VHL-201ENST00000256474 GPR158Q5T848 1215 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 MFSD6LQ8IWD5 586 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 SMG8Q8ND04 991 aaKnown RBP13.64□□□□□ -0.23
VHL-201ENST00000256474 IFT43Q96FT9 208 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 FCRL2Q96LA5 508 aaPredicted RBP13.64□□□□□ -0.23
VHL-201ENST00000256474 FAM192AQ9GZU8 254 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 ABHD16BQ9H3Z7 469 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 IRAK4Q9NWZ3 460 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 TTC3P53804 2025 aa13.64□□□□□ -0.23
VHL-201ENST00000256474 PAGE1O75459 146 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 SIX3O95343 332 aaPredicted RBP13.63□□□□□ -0.23
VHL-201ENST00000256474 CD86P42081 329 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 GRIA3P42263 894 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 PKN3Q6P5Z2 889 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 RP9Q8TA86 221 aaKnown RBP13.63□□□□□ -0.23
VHL-201ENST00000256474 FAM110BQ8TC76 370 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 SNRNP27Q8WVK2 155 aaKnown RBP13.63□□□□□ -0.23
VHL-201ENST00000256474 LPGAT1Q92604 370 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 TMEM79Q9BSE2 394 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 MRPL46Q9H2W6 279 aaKnown RBP13.63□□□□□ -0.23
VHL-201ENST00000256474 ADAM28Q9UKQ2 775 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 PPP6CO00743 305 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 GJB3O75712 270 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 CCR1P32246 355 aa13.63□□□□□ -0.23
VHL-201ENST00000256474 C9orf131Q5VYM1 1079 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms