RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ARHGAP26Q9UNA1 814 aa19.13■□□□□ 0.65
TRIM47-201ENST00000254816 REV3LO60673 3130 aa19.13■□□□□ 0.65
TRIM47-201ENST00000254816 C2orf16Q68DN1 1984 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 AP3B1O00203 1094 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 MT-ND3P03897 115 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 MFN1Q8IWA4 741 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 C12orf76Q8N812 135 aaPredicted RBP19.12■□□□□ 0.65
TRIM47-201ENST00000254816 NSMCE3Q96MG7 304 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 PBX4Q9BYU1 374 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 SLC40A1Q9NP59 571 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 SENP1Q9P0U3 644 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 ZNF180Q9UJW8 692 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 MAGEB16A2A368 324 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 RPA3P35244 121 aaPredicted RBP19.12■□□□□ 0.65
TRIM47-201ENST00000254816 MGAT5Q09328 741 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 CYTH1Q15438 398 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 PCID2Q5JVF3 399 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 MROH9Q5TGP6 573 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 MARK2Q7KZI7 788 aaKnown RBP19.12■□□□□ 0.65
TRIM47-201ENST00000254816 CDKL2Q92772 493 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 USP13Q92995 863 aaPredicted RBP19.12■□□□□ 0.65
TRIM47-201ENST00000254816 TADA1Q96BN2 335 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 ZSWIM3Q96MP5 696 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 AGAP2Q99490 1192 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 FEM1AQ9BSK4 669 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 KIFC1Q9BW19 673 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 NKX2-4Q9H2Z4 354 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 C12orf65Q9H3J6 166 aaKnown RBP19.12■□□□□ 0.65
TRIM47-201ENST00000254816 TASP1Q9H6P5 420 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 VPS45Q9NRW7 570 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 VPS28Q9UK41 221 aa19.12■□□□□ 0.65
TRIM47-201ENST00000254816 C5orf42Q9H799 3197 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 HMX2A2RU54 273 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 FAM47DPA6NHR8 397 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 XYLBO75191 536 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 CD160O95971 181 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 HOXA9P31269 272 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 FOXN2P32314 431 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 SEPT6Q14141 434 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 CBX2Q14781 532 aaPredicted RBP19.11■□□□□ 0.65
TRIM47-201ENST00000254816 HSP90AA5PQ58FG0 334 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 PRSS36Q5K4E3 855 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 APCDD1Q8J025 514 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 GDPD5Q8WTR4 605 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 ZNF707Q96C28 371 aaPredicted RBP19.11■□□□□ 0.65
TRIM47-201ENST00000254816 SAMD11Q96NU1 681 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 PRKD2Q9BZL6 878 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 ZFATQ9P243 1243 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 SEPT3Q9UH03 358 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 ZNF510Q9Y2H8 683 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 USP15Q9Y4E8 981 aaPredicted RBP19.11■□□□□ 0.65
TRIM47-201ENST00000254816 TYROBPO43914 113 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 PRAMEF12O95522 483 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 SNRPAP09012 282 aaKnown RBP19.11■□□□□ 0.65
TRIM47-201ENST00000254816 HNRNPA1P09651 372 aaKnown RBP eCLIP19.11■□□□□ 0.65
TRIM47-201ENST00000254816 CA4P22748 312 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 SCNN1BP51168 640 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 WDR4P57081 412 aaKnown RBP19.11■□□□□ 0.65
TRIM47-201ENST00000254816 SLC1A5Q15758 541 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 ARHGAP15Q53QZ3 475 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 PKN3Q6P5Z2 889 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 RTL10Q7L3V2 364 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 TRPM8Q7Z2W7 1104 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 BBS5Q8N3I7 341 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 CPXM2Q8N436 756 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 PPHLN1Q8NEY8 458 aaKnown RBP19.11■□□□□ 0.65
TRIM47-201ENST00000254816 MGME1Q9BQP7 344 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 C20orf96Q9NUD7 363 aaPredicted RBP19.11■□□□□ 0.65
TRIM47-201ENST00000254816 SLC2A6Q9UGQ3 507 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 OR51B4Q9Y5P0 310 aa19.11■□□□□ 0.65
TRIM47-201ENST00000254816 PRPF4O43172 522 aaKnown RBP eCLIP19.1■□□□□ 0.659e-7■■■□□ 16.9
TRIM47-201ENST00000254816 KRT37O76014 449 aa19.1■□□□□ 0.65
TRIM47-201ENST00000254816 FGF19O95750 216 aa19.1■□□□□ 0.65
TRIM47-201ENST00000254816 PYGBP11216 843 aa19.1■□□□□ 0.65
TRIM47-201ENST00000254816 GBP2P32456 591 aaPredicted RBP19.1■□□□□ 0.65
TRIM47-201ENST00000254816 SIRPB2Q5JXA9 342 aa19.1■□□□□ 0.65
TRIM47-201ENST00000254816 CGB2Q6NT52 195 aa19.1■□□□□ 0.65
TRIM47-201ENST00000254816 PACS1Q6VY07 963 aa19.1■□□□□ 0.65
TRIM47-201ENST00000254816 KCNMB4Q86W47 210 aa19.1■□□□□ 0.65
TRIM47-201ENST00000254816 PSKH2Q96QS6 385 aa19.1■□□□□ 0.65
TRIM47-201ENST00000254816 NOD2Q9HC29 1040 aa19.1■□□□□ 0.65
TRIM47-201ENST00000254816 TCAF1Q9Y4C2 921 aa19.1■□□□□ 0.65
TRIM47-201ENST00000254816 MYO9BQ13459 2157 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 ZMPSTE24O75844 475 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 CEBPBP17676 345 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 PFKLP17858 780 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 NRIP1P48552 1158 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 GALNT3Q14435 633 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 MPPE1Q53F39 396 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 ESRP1Q6NXG1 681 aaKnown RBP19.09■□□□□ 0.65
TRIM47-201ENST00000254816 ALG14Q96F25 216 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 MAGEB18Q96M61 343 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 TLE6Q9H808 572 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 TDP1Q9NUW8 608 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 EPOPA6NHQ4 379 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 KRT38O76015 456 aa19.09■□□□□ 0.65
TRIM47-201ENST00000254816 ATXN1LP0C7T5 689 aaKnown RBP19.09■□□□□ 0.65
TRIM47-201ENST00000254816 DDX6P26196 483 aaKnown RBP eCLIP19.09■□□□□ 0.651e-8■■■■■ 66.6
TRIM47-201ENST00000254816 SERPINH1P50454 418 aaKnown RBP19.09■□□□□ 0.65
TRIM47-201ENST00000254816 PDE12Q6L8Q7 609 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms