RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 HABP4Q5JVS0 413 aaKnown RBP18.65■□□□□ 0.58
LRP3-201ENST00000253193 AGAP9Q5VTM2 703 aa18.65■□□□□ 0.58
LRP3-201ENST00000253193 IFNEQ86WN2 208 aa18.65■□□□□ 0.58
LRP3-201ENST00000253193 HEXDCQ8WVB3 486 aa18.65■□□□□ 0.58
LRP3-201ENST00000253193 KLHL5Q96PQ7 755 aa18.65■□□□□ 0.58
LRP3-201ENST00000253193 EML4Q9HC35 981 aaKnown RBP18.65■□□□□ 0.58
LRP3-201ENST00000253193 GLOD4Q9HC38 313 aa18.65■□□□□ 0.58
LRP3-201ENST00000253193 AP4B1Q9Y6B7 739 aa18.65■□□□□ 0.58
LRP3-201ENST00000253193 SF3B1O75533 1304 aaKnown RBP eCLIP18.65■□□□□ 0.58
LRP3-201ENST00000253193 PTGESO14684 152 aa18.64■□□□□ 0.58
LRP3-201ENST00000253193 PAGE1O75459 146 aa18.64■□□□□ 0.58
LRP3-201ENST00000253193 CCR1P32246 355 aa18.64■□□□□ 0.58
LRP3-201ENST00000253193 SLC1A2P43004 574 aa18.64■□□□□ 0.58
LRP3-201ENST00000253193 FASTKQ14296 549 aaKnown RBP18.64■□□□□ 0.58
LRP3-201ENST00000253193 FER1L6Q2WGJ9 1857 aa18.64■□□□□ 0.58
LRP3-201ENST00000253193 PAOXQ6QHF9 649 aa18.64■□□□□ 0.58
LRP3-201ENST00000253193 MIB1Q86YT6 1006 aa18.64■□□□□ 0.58
LRP3-201ENST00000253193 KCTD13Q8WZ19 329 aa18.64■□□□□ 0.58
LRP3-201ENST00000253193 SLC2A13Q96QE2 648 aa18.64■□□□□ 0.58
LRP3-201ENST00000253193 DMAP1Q9NPF5 467 aaPredicted RBP18.64■□□□□ 0.58
LRP3-201ENST00000253193 FAM105AQ9NUU6 356 aa18.64■□□□□ 0.58
LRP3-201ENST00000253193 PRKCGP05129 697 aa18.64■□□□□ 0.57
LRP3-201ENST00000253193 ODC1P11926 461 aa18.64■□□□□ 0.57
LRP3-201ENST00000253193 CPB1P15086 417 aa18.64■□□□□ 0.57
LRP3-201ENST00000253193 CDH13P55290 713 aa18.64■□□□□ 0.57
LRP3-201ENST00000253193 CNSTQ6PJW8 725 aa18.64■□□□□ 0.57
LRP3-201ENST00000253193 ALKAL1Q6UXT8 129 aa18.64■□□□□ 0.57
LRP3-201ENST00000253193 CEP97Q8IW35 865 aa18.64■□□□□ 0.57
LRP3-201ENST00000253193 CNTD1Q8N815 330 aa18.64■□□□□ 0.57
LRP3-201ENST00000253193 NTAN1Q96AB6 310 aa18.64■□□□□ 0.57
LRP3-201ENST00000253193 GPR22Q99680 433 aa18.64■□□□□ 0.57
LRP3-201ENST00000253193 PCDHAC1Q9H158 963 aa18.64■□□□□ 0.57
LRP3-201ENST00000253193 ALG9Q9H6U8 611 aa18.64■□□□□ 0.57
LRP3-201ENST00000253193 DDX18Q9NVP1 670 aaKnown RBP18.64■□□□□ 0.57
LRP3-201ENST00000253193 UBA6A0AVT1 1052 aaPredicted RBP18.64■□□□□ 0.57
LRP3-201ENST00000253193 TTC24A2A3L6 582 aaPredicted RBP18.64■□□□□ 0.57
LRP3-201ENST00000253193 PRPF19Q9UMS4 504 aaKnown RBP18.64■□□□□ 0.57
LRP3-201ENST00000253193 ZNF646O15015 1829 aaPredicted RBP18.63■□□□□ 0.57
LRP3-201ENST00000253193 AKAP10O43572 662 aa18.63■□□□□ 0.57
LRP3-201ENST00000253193 SLC35E2BP0CK96 405 aa18.63■□□□□ 0.57
LRP3-201ENST00000253193 GALNT2Q10471 571 aa18.63■□□□□ 0.57
LRP3-201ENST00000253193 STX5Q13190 355 aa18.63■□□□□ 0.57
LRP3-201ENST00000253193 DYNC1I2Q13409 638 aaKnown RBP18.63■□□□□ 0.57
LRP3-201ENST00000253193 GK3PQ14409 553 aa18.63■□□□□ 0.57
LRP3-201ENST00000253193 DCLRE1AQ6PJP8 1040 aa18.63■□□□□ 0.57
LRP3-201ENST00000253193 BLOC1S5Q8TDH9 187 aa18.63■□□□□ 0.57
LRP3-201ENST00000253193 CAAP1Q9H8G2 361 aa18.63■□□□□ 0.57
LRP3-201ENST00000253193 CDH9Q9ULB4 789 aa18.63■□□□□ 0.57
LRP3-201ENST00000253193 HDCP19113 662 aa18.63■□□□□ 0.57
LRP3-201ENST00000253193 PSME3P61289 254 aa18.63■□□□□ 0.57
LRP3-201ENST00000253193 SLC5A9Q2M3M2 681 aa18.63■□□□□ 0.57
LRP3-201ENST00000253193 TIGD5Q53EQ6 642 aa18.63■□□□□ 0.57
LRP3-201ENST00000253193 OLFML2BQ68BL8 750 aa18.63■□□□□ 0.57
LRP3-201ENST00000253193 FAM43BQ6ZT52 329 aaPredicted RBP18.63■□□□□ 0.57
LRP3-201ENST00000253193 BRI3BPQ8WY22 251 aa18.63■□□□□ 0.57
LRP3-201ENST00000253193 EFHD1Q9BUP0 239 aa18.63■□□□□ 0.57
LRP3-201ENST00000253193 TSR3Q9UJK0 312 aaKnown RBP18.63■□□□□ 0.57
LRP3-201ENST00000253193 COPG1Q9Y678 874 aaKnown RBP18.63■□□□□ 0.57
LRP3-201ENST00000253193 I6L893 689 aaPredicted RBP18.63■□□□□ 0.57
LRP3-201ENST00000253193 ITGA7Q13683 1181 aa18.63■□□□□ 0.57
LRP3-201ENST00000253193 UBXN11Q5T124 520 aa18.63■□□□□ 0.57
LRP3-201ENST00000253193 CXCL17Q6UXB2 119 aa18.63■□□□□ 0.57
LRP3-201ENST00000253193 AMIGO2Q86SJ2 522 aa18.63■□□□□ 0.57
LRP3-201ENST00000253193 DIS3LQ8TF46 1054 aaKnown RBP18.63■□□□□ 0.57
LRP3-201ENST00000253193 SLC39A8Q9C0K1 460 aa18.63■□□□□ 0.57
LRP3-201ENST00000253193 RRN3Q9NYV6 651 aa18.63■□□□□ 0.57
LRP3-201ENST00000253193 C6orf203Q9P0P8 240 aaPredicted RBP18.63■□□□□ 0.57
LRP3-201ENST00000253193 C9IYK1 514 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 OR4Q2P0C623 313 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 WNT3AP56704 352 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 GJA9P57773 515 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 CLEC6AQ6EIG7 209 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 SMYD5Q6GMV2 418 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 OVOS1Q6IE37 1185 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 TMEM86AQ8N2M4 240 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 CATSPER1Q8NEC5 780 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 EMID1Q96A84 441 aaPredicted RBP18.62■□□□□ 0.57
LRP3-201ENST00000253193 UPF3AQ9H1J1 476 aaKnown RBP18.62■□□□□ 0.57
LRP3-201ENST00000253193 GNEQ9Y223 722 aaKnown RBP18.62■□□□□ 0.57
LRP3-201ENST00000253193 LZTS1Q9Y250 596 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 C9JVG2 144 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 PSMD12O00232 456 aaPredicted RBP18.62■□□□□ 0.57
LRP3-201ENST00000253193 ZNF195O14628 629 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 ZNF189O75820 626 aaPredicted RBP18.62■□□□□ 0.57
LRP3-201ENST00000253193 SEC24DO94855 1032 aaPredicted RBP18.62■□□□□ 0.57
LRP3-201ENST00000253193 F2P00734 622 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 GFAPP14136 432 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 ATP5F1P24539 256 aaPredicted RBP18.62■□□□□ 0.57
LRP3-201ENST00000253193 CD86P42081 329 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 AIF1P55008 147 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 CCL14Q16627 93 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 RBM20Q5T481 1227 aaKnown RBP18.62■□□□□ 0.57
LRP3-201ENST00000253193 OR52K2Q8NGK3 314 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 RDH11Q8TC12 318 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 HIC2Q96JB3 615 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 PIRTP0C851 137 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 ARSAP15289 507 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 PRDX6P30041 224 aa18.62■□□□□ 0.57
LRP3-201ENST00000253193 PCBP1Q15365 356 aaKnown RBP eCLIP18.62■□□□□ 0.57
LRP3-201ENST00000253193 PGM2L1Q6PCE3 622 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms