RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 TBC1D3IA0A087WXS9 549 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 TBC1D3EA0A087X179 549 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 TBC1D3KA0A087X1G2 549 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 A0A1B0GTW7 788 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 A0A1W2PPC4 97 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 TBC1D3FA6NER0 549 aaPredicted RBP14.42□□□□□ -0.1
CNN1-201ENST00000252456 C16orf96A6NNT2 1141 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 TBC1D3LB9A6J9 549 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 BCAT2O15382 392 aaPredicted RBP14.42□□□□□ -0.1
CNN1-201ENST00000252456 PSTPIP1O43586 416 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 IPO7O95373 1038 aaKnown RBP14.42□□□□□ -0.1
CNN1-201ENST00000252456 TBC1D3HP0C7X1 549 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 ADRB3P13945 408 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 ENGP17813 658 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 ABL2P42684 1182 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 NEK3P51956 506 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 LIMK1P53667 647 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 RFTN1Q14699 578 aaPredicted RBP14.42□□□□□ -0.1
CNN1-201ENST00000252456 TAZQ16635 292 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 ZNF805Q5CZA5 627 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 TMCO4Q5TGY1 634 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 SLC9A4Q6AI14 798 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 TBC1D3GQ6DHY5 549 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 TBC1D3CQ6IPX1 549 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 RABEPKQ7Z6M1 372 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 TRIM69Q86WT6 500 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 TBC1D3Q8IZP1 549 aaPredicted RBP14.42□□□□□ -0.1
CNN1-201ENST00000252456 ATPAF2Q8N5M1 289 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 NETO1Q8TDF5 533 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 KLHL32Q96NJ5 620 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 NUSAP1Q9BXS6 441 aaKnown RBP14.42□□□□□ -0.1
CNN1-201ENST00000252456 OSBPL1AQ9BXW6 950 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 CPEB1Q9BZB8 566 aaKnown RBP14.42□□□□□ -0.1
CNN1-201ENST00000252456 TM9SF3Q9HD45 589 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 DYRK4Q9NR20 520 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 LRRK1Q38SD2 2015 aa14.42□□□□□ -0.1
CNN1-201ENST00000252456 WNT9AO14904 365 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 PIGNO95427 931 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 KRT1P04264 644 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 TNNT1P13805 278 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 GNSP15586 552 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 GARSP41250 739 aaKnown RBP14.41□□□□□ -0.1
CNN1-201ENST00000252456 CSNK1DP48730 415 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 GSDMDP57764 484 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 LBRQ14739 615 aaKnown RBP14.41□□□□□ -0.1
CNN1-201ENST00000252456 ZFYVE27Q5T4F4 411 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 STPG1Q5TH74 334 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 LAYNQ6UX15 382 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 MFSD7Q6UXD7 560 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 GDPD4Q6W3E5 623 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 PGBD5Q8N414 524 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 LRRC57Q8N9N7 239 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 KRT35Q92764 455 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 RNF25Q96BH1 459 aaPredicted RBP14.41□□□□□ -0.1
CNN1-201ENST00000252456 PREBQ9HCU5 417 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 DTLQ9NZJ0 730 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 TRIM10Q9UDY6 481 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 FADS3Q9Y5Q0 445 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 TSPAN11A1L157 253 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 CNOT1A5YKK6 2376 aaKnown RBP14.41□□□□□ -0.1
CNN1-201ENST00000252456 ARHGAP33O14559 1287 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 SLC30A4O14863 429 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 CR2P20023 1033 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 MAT2AP31153 395 aaKnown RBP14.41□□□□□ -0.1
CNN1-201ENST00000252456 CDKN2BP42772 138 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 NSUN2Q08J23 767 aaKnown RBP eCLIP14.41□□□□□ -0.1
CNN1-201ENST00000252456 GRIK2Q13002 908 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 TMEM259Q4ZIN3 620 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 DAAM2Q86T65 1068 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 ZSWIM9Q86XI8 627 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 LRRC49Q8IUZ0 686 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 OR2I1PQ8NGU4 316 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 LRRN4Q8WUT4 740 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 SLC6A18Q96N87 628 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 CINPQ9BW66 212 aaPredicted RBP14.41□□□□□ -0.1
CNN1-201ENST00000252456 DDX56Q9NY93 547 aaKnown RBP14.41□□□□□ -0.1
CNN1-201ENST00000252456 DKK3Q9UBP4 350 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 SEPT3Q9UH03 358 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 GGT7Q9UJ14 662 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 ZFR2Q9UPR6 939 aaKnown RBP14.41□□□□□ -0.1
CNN1-201ENST00000252456 ZKSCAN5Q9Y2L8 839 aa14.41□□□□□ -0.1
CNN1-201ENST00000252456 GRID2IPA4D2P6 1211 aa14.4□□□□□ -0.1
CNN1-201ENST00000252456 GOLGA6L6A8MZA4 724 aa14.4□□□□□ -0.1
CNN1-201ENST00000252456 TM4SF5O14894 197 aa14.4□□□□□ -0.1
CNN1-201ENST00000252456 AREL1O15033 823 aa14.4□□□□□ -0.1
CNN1-201ENST00000252456 AP1G1O43747 822 aa14.4□□□□□ -0.1
CNN1-201ENST00000252456 RNGTTO60942 597 aaKnown RBP14.4□□□□□ -0.1
CNN1-201ENST00000252456 GRIA4P48058 902 aa14.4□□□□□ -0.1
CNN1-201ENST00000252456 CSNK1EP49674 416 aaKnown RBP14.4□□□□□ -0.1
CNN1-201ENST00000252456 AFF3P51826 1226 aaKnown RBP14.4□□□□□ -0.1
CNN1-201ENST00000252456 RACK1P63244 317 aaKnown RBP14.4□□□□□ -0.1
CNN1-201ENST00000252456 RAD51Q06609 339 aa14.4□□□□□ -0.1
CNN1-201ENST00000252456 LRRC73Q5JTD7 316 aa14.4□□□□□ -0.1
CNN1-201ENST00000252456 NEK5Q6P3R8 708 aa14.4□□□□□ -0.1
CNN1-201ENST00000252456 FBXL19Q6PCT2 694 aa14.4□□□□□ -0.1
CNN1-201ENST00000252456 KIAA1328Q86T90 577 aa14.4□□□□□ -0.1
CNN1-201ENST00000252456 SRLQ86TD4 932 aa14.4□□□□□ -0.1
CNN1-201ENST00000252456 KATNAL2Q8IYT4 538 aa14.4□□□□□ -0.1
CNN1-201ENST00000252456 TEX26Q8N6G2 289 aa14.4□□□□□ -0.1
CNN1-201ENST00000252456 MAML1Q92585 1016 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms