RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 SRGAP2O75044 1071 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 C1QL1O75973 258 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 PCDH8O95206 1070 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 MT-CO3P00414 261 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 CSF2P04141 144 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 MMEP08473 750 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 CHRNB2P17787 502 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 EEF1GP26641 437 aaKnown RBP10.49□□□□□ -0.73
VPS50-201ENST00000251739 ADRA1BP35368 520 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 ACVRL1P37023 503 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 ABL2P42684 1182 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 PTPN9P43378 593 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 RECQLP46063 649 aaPredicted RBP10.49□□□□□ -0.73
VPS50-201ENST00000251739 MAPKAPK2P49137 400 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 GSCP56915 257 aaPredicted RBP10.49□□□□□ -0.73
VPS50-201ENST00000251739 JAM2P57087 298 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 RPS21P63220 83 aaKnown RBP10.49□□□□□ -0.73
VPS50-201ENST00000251739 SH3BP2P78314 561 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 SKOR1P84550 965 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 FMO1Q01740 532 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 TLE3Q04726 772 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 PTP4A2Q12974 167 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 TPD52L1Q16890 204 aaPredicted RBP10.49□□□□□ -0.73
VPS50-201ENST00000251739 HSP90AA4PQ58FG1 418 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 CARD16Q5EG05 197 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 NAA35Q5VZE5 725 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 Q6ZSR6 202 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 PTAR1Q7Z6K3 402 aaPredicted RBP10.49□□□□□ -0.73
VPS50-201ENST00000251739 ZNF677Q86XU0 584 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 DRC7Q8IY82 874 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 MSANTD4Q8NCY6 345 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 ZNF548Q8NEK5 533 aaPredicted RBP10.49□□□□□ -0.73
VPS50-201ENST00000251739 ASB12Q8WXK4 309 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 CPA5Q8WXQ8 436 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 BAP1Q92560 729 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 CENPIQ92674 756 aaPredicted RBP10.49□□□□□ -0.73
VPS50-201ENST00000251739 FGF11Q92914 225 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 ARHGEF2Q92974 986 aaKnown RBP10.49□□□□□ -0.73
VPS50-201ENST00000251739 HIC2Q96JB3 615 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 APOLD1Q96LR9 279 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 LENG8Q96PV6 779 aaPredicted RBP10.49□□□□□ -0.73
VPS50-201ENST00000251739 SPON2Q9BUD6 331 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 OSBPL2Q9H1P3 480 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 PDCL3Q9H2J4 239 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 METTL5Q9NRN9 209 aaKnown RBP10.49□□□□□ -0.73
VPS50-201ENST00000251739 SAMSN1Q9NSI8 373 aaKnown RBP10.49□□□□□ -0.73
VPS50-201ENST00000251739 TMEM248Q9NWD8 314 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 KLF15Q9UIH9 416 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 FKBPLQ9UIM3 349 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 RAI2Q9Y5P3 530 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 AK5Q9Y6K8 562 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 MYO18BQ8IUG5 2567 aa10.49□□□□□ -0.73
VPS50-201ENST00000251739 FAM170AA1A519 330 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 C16orf96A6NNT2 1141 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 FAM72CH0Y354 149 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 K7ESM1 405 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 AREL1O15033 823 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 ATXN7O15265 892 aaPredicted RBP10.48□□□□□ -0.73
VPS50-201ENST00000251739 NEBLO76041 1014 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 GSRP00390 522 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 RHOQP17081 205 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 ETFBP38117 255 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 PFN3P60673 137 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 HNRNPKP61978 463 aaKnown RBP eCLIP10.48□□□□□ -0.73
VPS50-201ENST00000251739 DAB2P98082 770 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 ATP11AP98196 1134 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 CDR2Q01850 454 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 C15orf59Q2T9L4 293 aaPredicted RBP10.48□□□□□ -0.73
VPS50-201ENST00000251739 CCDC14Q49A88 953 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 TCP11X2Q5H9J9 407 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 CT47A1Q5JQC4 288 aaPredicted RBP10.48□□□□□ -0.73
VPS50-201ENST00000251739 FAM72AQ5TYM5 149 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 CDKAL1Q5VV42 579 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 FAM72DQ6L9T8 149 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 STRADAQ7RTN6 431 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 PARGQ86W56 976 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 FAM72BQ86X60 149 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 ZNF511Q8NB15 262 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 DENND6BQ8NEG7 585 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 JOSD2Q8TAC2 188 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 NTAN1Q96AB6 310 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 RAB7BQ96AH8 199 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 FEM1CQ96JP0 617 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 TM6SF2Q9BZW4 377 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 NOL6Q9H6R4 1146 aaKnown RBP10.48□□□□□ -0.73
VPS50-201ENST00000251739 DNAJC28Q9NX36 388 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 OR12D3Q9UGF7 316 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 GGT7Q9UJ14 662 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 CSNK1G3Q9Y6M4 447 aa10.48□□□□□ -0.73
VPS50-201ENST00000251739 ARHGEF17Q96PE2 2063 aaPredicted RBP10.48□□□□□ -0.73
VPS50-201ENST00000251739 A0A1W2PNU3 283 aaPredicted RBP10.47□□□□□ -0.73
VPS50-201ENST00000251739 NEMP2A6NFY4 417 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 EPHB6O15197 1021 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 RRP8O43159 456 aaKnown RBP10.47□□□□□ -0.73
VPS50-201ENST00000251739 TSPAN6O43657 245 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 LRIG2O94898 1065 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 PAK4O96013 591 aaPredicted RBP10.47□□□□□ -0.73
VPS50-201ENST00000251739 ALPPL2P10696 532 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 MYF5P13349 255 aa10.47□□□□□ -0.73
VPS50-201ENST00000251739 GKP32189 559 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms