RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 DEPDC7Q96QD5 511 aa13.12□□□□□ -0.31
APOBEC3A-201ENST00000249116 C1QTNF2Q9BXJ5 285 aa13.12□□□□□ -0.31
APOBEC3A-201ENST00000249116 OSBPL1AQ9BXW6 950 aa13.12□□□□□ -0.31
APOBEC3A-201ENST00000249116 ABCG4Q9H172 646 aa13.12□□□□□ -0.31
APOBEC3A-201ENST00000249116 NLRC4Q9NPP4 1024 aa13.12□□□□□ -0.31
APOBEC3A-201ENST00000249116 GPR27Q9NS67 375 aa13.12□□□□□ -0.31
APOBEC3A-201ENST00000249116 NCKIPSDQ9NZQ3 722 aa13.12□□□□□ -0.31
APOBEC3A-201ENST00000249116 ACTL7AQ9Y615 435 aa13.12□□□□□ -0.31
APOBEC3A-201ENST00000249116 CSNK1G3Q9Y6M4 447 aa13.12□□□□□ -0.31
APOBEC3A-201ENST00000249116 ANKRD11Q6UB99 2663 aaPredicted RBP13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 ZFYVE26Q68DK2 2539 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 FREM2Q5SZK8 3169 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 A0A1W2PQC6 194 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 ZSCAN5CA6NGD5 496 aaPredicted RBP13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 IGLON5A6NGN9 336 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 C2CD4BA6NLJ0 364 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 K7ESM1 405 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 KRIT1O00522 736 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 RAD51BO15315 384 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 LRIG2O94898 1065 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 POP4O95707 220 aaKnown RBP13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 PLEKP08567 350 aaPredicted RBP13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 KRT3P12035 628 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 NME1P15531 152 aaKnown RBP13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 STAT1P42224 750 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 NSFP46459 744 aaKnown RBP13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 PDE1CQ14123 709 aaPredicted RBP13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 FZD2Q14332 565 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 NR1I3Q14994 352 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 TBC1D25Q3MII6 688 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 RAB6CQ53S08 254 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 ZCCHC8Q6NZY4 707 aaKnown RBP13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 PHLDB2Q86SQ0 1253 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 ZNF354CQ86Y25 554 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 LSMEM2Q8N112 164 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 ZNF548Q8NEK5 533 aaPredicted RBP13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 OR6K2Q8NGY2 324 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 JOSD2Q8TAC2 188 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 FAM172AQ8WUF8 416 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 BBC3Q96PG8 261 aaPredicted RBP13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 SELENOOQ9BVL4 669 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 RAB6CQ9H0N0 254 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 PLSCR2Q9NRY7 297 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 NDFIP2Q9NV92 336 aa13.11□□□□□ -0.31
APOBEC3A-201ENST00000249116 GOLGA4Q13439 2230 aaKnown RBP13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 FAM72CH0Y354 149 aa13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 UGT2B4P06133 528 aa13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 CHRNB2P17787 502 aa13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 GKP32189 559 aa13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 ABL2P42684 1182 aa13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 GSCP56915 257 aaPredicted RBP13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 UBASH3AP57075 661 aa13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 PTK2BQ14289 1009 aa13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 MYLK3Q32MK0 819 aa13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 FAM72AQ5TYM5 149 aa13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 CDCP2Q5VXM1 449 aa13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 FAM72DQ6L9T8 149 aa13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 FAM72BQ86X60 149 aa13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 BTN2A2Q8WVV5 523 aa13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 CASKIN2Q8WXE0 1202 aa13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 CENPIQ92674 756 aaPredicted RBP13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 NTAN1Q96AB6 310 aa13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 GDAP1L1Q96MZ0 367 aa13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 KLHL32Q96NJ5 620 aa13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 KLF6Q99612 283 aaPredicted RBP13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 IL12RB2Q99665 862 aa13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 PRORYQ9H606 182 aa13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 ADAM22Q9P0K1 906 aa13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 PCDHB1Q9Y5F3 818 aa13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 DSPP15924 2871 aaKnown RBP13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 APC2O95996 2303 aa13.1□□□□□ -0.31
APOBEC3A-201ENST00000249116 URB1O60287 2271 aaKnown RBP13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 ACACAQ13085 2346 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 ANKRD62A6NC57 917 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 AQP9O43315 295 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 BUB1O43683 1085 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 KDELR3O43731 214 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 NEBLO76041 1014 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 CALB1P05937 261 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 UNGP13051 313 aaPredicted RBP13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 JUNDP17535 347 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 GPD1P21695 349 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 THOP1P52888 689 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 HDAC4P56524 1084 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 CCDC173Q0VFZ6 552 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 GDPD4Q6W3E5 623 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 LEKR1Q6ZMV7 388 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 SLFN11Q7Z7L1 901 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 TTC7BQ86TV6 843 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 CCDC185Q8N715 623 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 ZNF248Q8NDW4 579 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 IFI44Q8TCB0 444 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 MAPK15Q8TD08 544 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 GLMNQ92990 594 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 ZNF578Q96N58 590 aaPredicted RBP13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 FCRL3Q96P31 734 aaPredicted RBP13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 C1QTNF7Q9BXJ2 289 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 IFNKQ9P0W0 207 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 SPASTQ9UBP0 616 aa13.09□□□□□ -0.31
APOBEC3A-201ENST00000249116 SALL4Q9UJQ4 1053 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms