RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 GAS2O43903 313 aaKnown RBP17.04■□□□□ 0.32
SGPP1-201ENST00000247225 ATP6V1G1O75348 118 aa17.04■□□□□ 0.32
SGPP1-201ENST00000247225 C1QTNF8P60827 252 aa17.04■□□□□ 0.32
SGPP1-201ENST00000247225 TBCELQ5QJ74 424 aa17.04■□□□□ 0.32
SGPP1-201ENST00000247225 TWF2Q6IBS0 349 aaKnown RBP17.04■□□□□ 0.32
SGPP1-201ENST00000247225 OSTM1Q86WC4 334 aa17.04■□□□□ 0.32
SGPP1-201ENST00000247225 LSMEM2Q8N112 164 aa17.04■□□□□ 0.32
SGPP1-201ENST00000247225 PARP8Q8N3A8 854 aa17.04■□□□□ 0.32
SGPP1-201ENST00000247225 DNAJB14Q8TBM8 379 aa17.04■□□□□ 0.32
SGPP1-201ENST00000247225 ZFRQ96KR1 1074 aaKnown RBP17.04■□□□□ 0.32
SGPP1-201ENST00000247225 RAB26Q9ULW5 256 aa17.04■□□□□ 0.32
SGPP1-201ENST00000247225 CLEC11AQ9Y240 323 aa17.04■□□□□ 0.32
SGPP1-201ENST00000247225 COL2A1P02458 1487 aaPredicted RBP17.04■□□□□ 0.32
SGPP1-201ENST00000247225 TRIM38O00635 465 aa17.04■□□□□ 0.32
SGPP1-201ENST00000247225 CDH2P19022 906 aaPredicted RBP17.04■□□□□ 0.32
SGPP1-201ENST00000247225 ESRRGP62508 458 aa17.04■□□□□ 0.32
SGPP1-201ENST00000247225 SOX4Q06945 474 aaPredicted RBP17.04■□□□□ 0.32
SGPP1-201ENST00000247225 IKBKEQ14164 716 aa17.04■□□□□ 0.32
SGPP1-201ENST00000247225 LDLRAP1Q5SW96 308 aa17.04■□□□□ 0.32
SGPP1-201ENST00000247225 PRAMEF19Q5SWL8 479 aa17.04■□□□□ 0.32
SGPP1-201ENST00000247225 KLC3Q6P597 504 aa17.04■□□□□ 0.32
SGPP1-201ENST00000247225 ARMCX2Q7L311 632 aa17.04■□□□□ 0.32
SGPP1-201ENST00000247225 GPRIN1Q7Z2K8 1008 aa17.04■□□□□ 0.32
SGPP1-201ENST00000247225 CENPLQ8N0S6 344 aaPredicted RBP17.04■□□□□ 0.32
SGPP1-201ENST00000247225 PRM3Q9NNZ6 103 aa17.04■□□□□ 0.32
SGPP1-201ENST00000247225 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.04■□□□□ 0.32
SGPP1-201ENST00000247225 TMCO1Q9UM00 188 aa17.04■□□□□ 0.32
SGPP1-201ENST00000247225 HACD1B0YJ81 288 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 ATP5BP06576 529 aaKnown RBP17.03■□□□□ 0.32
SGPP1-201ENST00000247225 TPP2P29144 1249 aaPredicted RBP17.03■□□□□ 0.32
SGPP1-201ENST00000247225 XIAPP98170 497 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 GRIK4Q16099 956 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 PABPC1LQ4VXU2 614 aaKnown RBP17.03■□□□□ 0.32
SGPP1-201ENST00000247225 PKDCCQ504Y2 493 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 ZFP1Q6P2D0 407 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 SOCS7O14512 581 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 INPP4BO15327 924 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 DENRO43583 198 aaKnown RBP17.03■□□□□ 0.32
SGPP1-201ENST00000247225 CRCPO75575 148 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 USP2O75604 605 aaPredicted RBP17.03■□□□□ 0.32
SGPP1-201ENST00000247225 CABYRO75952 493 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 SBK3P0C264 359 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 MTHFD1P11586 935 aaKnown RBP17.03■□□□□ 0.32
SGPP1-201ENST00000247225 SLC5A3P53794 718 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 STX1BP61266 288 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 TRIM25Q14258 630 aaKnown RBP17.03■□□□□ 0.32
SGPP1-201ENST00000247225 LPIN1Q14693 890 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 PTPRCAPQ14761 206 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 SH3D19Q5HYK7 790 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 REP15Q6BDI9 236 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 TFAP2DQ7Z6R9 452 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 CATSPER1Q8NEC5 780 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 DNAJB3Q8WWF6 145 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 NCSTNQ92542 709 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 HAUS8Q9BT25 410 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 UPF3AQ9H1J1 476 aaKnown RBP17.03■□□□□ 0.32
SGPP1-201ENST00000247225 MPP6Q9NZW5 540 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 SOCS2O14508 198 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 BCAS2O75934 225 aaPredicted RBP17.03■□□□□ 0.32
SGPP1-201ENST00000247225 LRIG2O94898 1065 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 SIX3O95343 332 aaPredicted RBP17.03■□□□□ 0.32
SGPP1-201ENST00000247225 SLC1A2P43004 574 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 NAA20P61599 178 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 CDH17Q12864 832 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 METTL21CQ5VZV1 264 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 KLHL35Q6PF15 583 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 FASTKD5Q7L8L6 764 aaKnown RBP17.03■□□□□ 0.32
SGPP1-201ENST00000247225 DHFR2Q86XF0 187 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 RIN3Q8TB24 985 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 PABPC5Q96DU9 382 aaKnown RBP17.03■□□□□ 0.32
SGPP1-201ENST00000247225 FBXL20Q96IG2 436 aa17.03■□□□□ 0.32
SGPP1-201ENST00000247225 SMIM28A0A1B0GU29 152 aa17.02■□□□□ 0.32
SGPP1-201ENST00000247225 MEIS3P2A8K0S8 358 aa17.02■□□□□ 0.32
SGPP1-201ENST00000247225 TMEM114B3SHH9 223 aa17.02■□□□□ 0.32
SGPP1-201ENST00000247225 DYNC1LI2O43237 492 aaPredicted RBP17.02■□□□□ 0.32
SGPP1-201ENST00000247225 MSI1O43347 362 aaKnown RBP17.02■□□□□ 0.32
SGPP1-201ENST00000247225 NOS2P35228 1153 aa17.02■□□□□ 0.32
SGPP1-201ENST00000247225 RAB10P61026 200 aa17.02■□□□□ 0.32
SGPP1-201ENST00000247225 PPP1R8Q12972 351 aaKnown RBP17.02■□□□□ 0.32
SGPP1-201ENST00000247225 UTS2BQ765I0 119 aa17.02■□□□□ 0.32
SGPP1-201ENST00000247225 EXOC8Q8IYI6 725 aa17.02■□□□□ 0.32
SGPP1-201ENST00000247225 PDZD8Q8NEN9 1154 aa17.02■□□□□ 0.32
SGPP1-201ENST00000247225 ESAMQ96AP7 390 aa17.02■□□□□ 0.32
SGPP1-201ENST00000247225 MYBPHLA2RUH7 354 aa17.02■□□□□ 0.31
SGPP1-201ENST00000247225 SDHDO14521 159 aa17.02■□□□□ 0.31
SGPP1-201ENST00000247225 SRP72O76094 671 aaKnown RBP17.02■□□□□ 0.31
SGPP1-201ENST00000247225 PCNAP12004 261 aa17.02■□□□□ 0.31
SGPP1-201ENST00000247225 ECT2LQ008S8 904 aa17.02■□□□□ 0.31
SGPP1-201ENST00000247225 GPR141Q7Z602 305 aa17.02■□□□□ 0.31
SGPP1-201ENST00000247225 TMEM135Q86UB9 458 aa17.02■□□□□ 0.31
SGPP1-201ENST00000247225 PIM3Q86V86 326 aa17.02■□□□□ 0.31
SGPP1-201ENST00000247225 MFSD6LQ8IWD5 586 aa17.02■□□□□ 0.31
SGPP1-201ENST00000247225 MAGEE2Q8TD90 523 aaPredicted RBP17.02■□□□□ 0.31
SGPP1-201ENST00000247225 HBEGFQ99075 208 aa17.02■□□□□ 0.31
SGPP1-201ENST00000247225 BRD8Q9H0E9 1235 aa17.02■□□□□ 0.31
SGPP1-201ENST00000247225 ARMC7Q9H6L4 198 aa17.02■□□□□ 0.31
SGPP1-201ENST00000247225 RBM22Q9NW64 420 aaKnown RBP eCLIP17.02■□□□□ 0.31
SGPP1-201ENST00000247225 CROTQ9UKG9 612 aa17.02■□□□□ 0.31
SGPP1-201ENST00000247225 J3QRK9 145 aa17.01■□□□□ 0.31
SGPP1-201ENST00000247225 LY75O60449 1722 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms