RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 GRIN3AQ8TCU5 1115 aa16.43■□□□□ 0.22
CLPP-201ENST00000245816 TSC1Q92574 1164 aa16.43■□□□□ 0.22
CLPP-201ENST00000245816 ARHGEF2Q92974 986 aaKnown RBP16.43■□□□□ 0.22
CLPP-201ENST00000245816 ISG20Q96AZ6 181 aaKnown RBP16.43■□□□□ 0.22
CLPP-201ENST00000245816 DEF6Q9H4E7 631 aa16.43■□□□□ 0.22
CLPP-201ENST00000245816 ATP13A1Q9HD20 1204 aa16.43■□□□□ 0.22
CLPP-201ENST00000245816 IMPACTQ9P2X3 320 aa16.43■□□□□ 0.22
CLPP-201ENST00000245816 MYO1AQ9UBC5 1043 aa16.43■□□□□ 0.22
CLPP-201ENST00000245816 SMG1Q96Q15 3661 aaKnown RBP16.42■□□□□ 0.22
CLPP-201ENST00000245816 MYO1FO00160 1098 aa16.42■□□□□ 0.22
CLPP-201ENST00000245816 KPNA3O00505 521 aaPredicted RBP16.42■□□□□ 0.22
CLPP-201ENST00000245816 RAD51BO15315 384 aa16.42■□□□□ 0.22
CLPP-201ENST00000245816 SLC31A1O15431 190 aa16.42■□□□□ 0.22
CLPP-201ENST00000245816 H2AFZP0C0S5 128 aa16.42■□□□□ 0.22
CLPP-201ENST00000245816 CLDN2P57739 230 aa16.42■□□□□ 0.22
CLPP-201ENST00000245816 POLD3Q15054 466 aaPredicted RBP16.42■□□□□ 0.22
CLPP-201ENST00000245816 SMAD1Q15797 465 aaKnown RBP16.42■□□□□ 0.22
CLPP-201ENST00000245816 PARP15Q460N3 678 aa16.42■□□□□ 0.22
CLPP-201ENST00000245816 TMEM259Q4ZIN3 620 aa16.42■□□□□ 0.22
CLPP-201ENST00000245816 TPRG1LQ5T0D9 272 aa16.42■□□□□ 0.22
CLPP-201ENST00000245816 GCNT7Q6ZNI0 430 aa16.42■□□□□ 0.22
CLPP-201ENST00000245816 H2AFVQ71UI9 128 aa16.42■□□□□ 0.22
CLPP-201ENST00000245816 PRPF39Q86UA1 669 aaKnown RBP16.42■□□□□ 0.22
CLPP-201ENST00000245816 SLC25A45Q8N413 288 aa16.42■□□□□ 0.22
CLPP-201ENST00000245816 CASKIN2Q8WXE0 1202 aa16.42■□□□□ 0.22
CLPP-201ENST00000245816 BMFQ96LC9 184 aa16.42■□□□□ 0.22
CLPP-201ENST00000245816 CCDC42Q96M95 316 aa16.42■□□□□ 0.22
CLPP-201ENST00000245816 TRIM7Q9C029 511 aa16.42■□□□□ 0.22
CLPP-201ENST00000245816 ERVMER34-1Q9H9K5 563 aa16.42■□□□□ 0.22
CLPP-201ENST00000245816 GDF3Q9NR23 364 aa16.42■□□□□ 0.22
CLPP-201ENST00000245816 UCKL1Q9NWZ5 548 aa16.42■□□□□ 0.22
CLPP-201ENST00000245816 DNAI1Q9UI46 699 aa16.42■□□□□ 0.22
CLPP-201ENST00000245816 GGT7Q9UJ14 662 aa16.42■□□□□ 0.22
CLPP-201ENST00000245816 AP4E1Q9UPM8 1137 aa16.42■□□□□ 0.22
CLPP-201ENST00000245816 C1QTNF3-AMACRE9PGA6 284 aa16.41■□□□□ 0.22
CLPP-201ENST00000245816 TRIM38O00635 465 aa16.41■□□□□ 0.22
CLPP-201ENST00000245816 KDELR3O43731 214 aa16.41■□□□□ 0.22
CLPP-201ENST00000245816 CREB3O43889 395 aa16.41■□□□□ 0.22
CLPP-201ENST00000245816 AKR1B10O60218 316 aa16.41■□□□□ 0.22
CLPP-201ENST00000245816 SDC3O75056 442 aa16.41■□□□□ 0.22
CLPP-201ENST00000245816 ABL2P42684 1182 aa16.41■□□□□ 0.22
CLPP-201ENST00000245816 NDST2P52849 883 aa16.41■□□□□ 0.22
CLPP-201ENST00000245816 CCDC15Q0P6D6 951 aa16.41■□□□□ 0.22
CLPP-201ENST00000245816 CYP4V2Q6ZWL3 525 aaPredicted RBP16.41■□□□□ 0.22
CLPP-201ENST00000245816 ERN2Q76MJ5 926 aaKnown RBP16.41■□□□□ 0.22
CLPP-201ENST00000245816 PARS2Q7L3T8 475 aaKnown RBP16.41■□□□□ 0.22
CLPP-201ENST00000245816 HORMAD1Q86X24 394 aa16.41■□□□□ 0.22
CLPP-201ENST00000245816 SLC22A18ASQ8N1D0 253 aa16.41■□□□□ 0.22
CLPP-201ENST00000245816 PCDH20Q8N6Y1 951 aaKnown RBP16.41■□□□□ 0.22
CLPP-201ENST00000245816 OR13H1Q8NG92 308 aa16.41■□□□□ 0.22
CLPP-201ENST00000245816 OR6K2Q8NGY2 324 aa16.41■□□□□ 0.22
CLPP-201ENST00000245816 TEKT4Q8WW24 435 aa16.41■□□□□ 0.22
CLPP-201ENST00000245816 CTNNBL1Q8WYA6 563 aaPredicted RBP16.41■□□□□ 0.22
CLPP-201ENST00000245816 SNRNP25Q9BV90 132 aaKnown RBP16.41■□□□□ 0.22
CLPP-201ENST00000245816 NUP85Q9BW27 656 aa16.41■□□□□ 0.22
CLPP-201ENST00000245816 HDAC8Q9BY41 377 aa16.41■□□□□ 0.22
CLPP-201ENST00000245816 NHEJ1Q9H9Q4 299 aaPredicted RBP16.41■□□□□ 0.22
CLPP-201ENST00000245816 PREBQ9HCU5 417 aa16.41■□□□□ 0.22
CLPP-201ENST00000245816 IL36AQ9UHA7 158 aa16.41■□□□□ 0.22
CLPP-201ENST00000245816 INTUQ9ULD6 942 aa16.41■□□□□ 0.22
CLPP-201ENST00000245816 ACACAQ13085 2346 aa16.4■□□□□ 0.22
CLPP-201ENST00000245816 ENC1O14682 589 aa16.4■□□□□ 0.22
CLPP-201ENST00000245816 DFNA5O60443 496 aa16.4■□□□□ 0.22
CLPP-201ENST00000245816 TMEM253P0C7T8 217 aa16.4■□□□□ 0.22
CLPP-201ENST00000245816 ITIH2P19823 946 aa16.4■□□□□ 0.22
CLPP-201ENST00000245816 ACADVLP49748 655 aa16.4■□□□□ 0.22
CLPP-201ENST00000245816 CCNHP51946 323 aaPredicted RBP16.4■□□□□ 0.22
CLPP-201ENST00000245816 TPI1P60174 286 aa16.4■□□□□ 0.22
CLPP-201ENST00000245816 DPYSL2Q16555 572 aa16.4■□□□□ 0.22
CLPP-201ENST00000245816 INO80DQ53TQ3 878 aaPredicted RBP16.4■□□□□ 0.22
CLPP-201ENST00000245816 CCDC157Q569K6 752 aa16.4■□□□□ 0.22
CLPP-201ENST00000245816 CARD16Q5EG05 197 aa16.4■□□□□ 0.22
CLPP-201ENST00000245816 IQCHQ86VS3 1027 aa16.4■□□□□ 0.22
CLPP-201ENST00000245816 LZTR1Q8N653 840 aa16.4■□□□□ 0.22
CLPP-201ENST00000245816 CNDP2Q96KP4 475 aaKnown RBP16.4■□□□□ 0.22
CLPP-201ENST00000245816 KLF6Q99612 283 aaPredicted RBP16.4■□□□□ 0.22
CLPP-201ENST00000245816 TM6SF2Q9BZW4 377 aa16.4■□□□□ 0.22
CLPP-201ENST00000245816 DHX35Q9H5Z1 703 aaKnown RBP16.4■□□□□ 0.22
CLPP-201ENST00000245816 ZWILCHQ9H900 591 aa16.4■□□□□ 0.22
CLPP-201ENST00000245816 GPR27Q9NS67 375 aa16.4■□□□□ 0.22
CLPP-201ENST00000245816 PCSK1NQ9UHG2 260 aa16.4■□□□□ 0.22
CLPP-201ENST00000245816 ANAPC7Q9UJX3 599 aa16.4■□□□□ 0.22
CLPP-201ENST00000245816 DMTF1Q9Y222 760 aa16.4■□□□□ 0.22
CLPP-201ENST00000245816 FADS3Q9Y5Q0 445 aa16.4■□□□□ 0.22
CLPP-201ENST00000245816 LOC400499M0QZD8 3231 aa16.4■□□□□ 0.22
CLPP-201ENST00000245816 KNTC1P50748 2209 aa16.39■□□□□ 0.22
CLPP-201ENST00000245816 TRABD2BA6NFA1 517 aa16.39■□□□□ 0.21
CLPP-201ENST00000245816 PRAMEF26H0Y7S4 382 aa16.39■□□□□ 0.21
CLPP-201ENST00000245816 EEF2KO00418 725 aaKnown RBP16.39■□□□□ 0.21
CLPP-201ENST00000245816 PRNPP04156 253 aa16.39■□□□□ 0.21
CLPP-201ENST00000245816 ITGAVP06756 1048 aa16.39■□□□□ 0.21
CLPP-201ENST00000245816 RECQLP46063 649 aaPredicted RBP16.39■□□□□ 0.21
CLPP-201ENST00000245816 TC2NQ8N9U0 490 aa16.39■□□□□ 0.21
CLPP-201ENST00000245816 ZNF564Q8TBZ8 553 aaPredicted RBP16.39■□□□□ 0.21
CLPP-201ENST00000245816 LRIG1Q96JA1 1093 aa16.39■□□□□ 0.21
CLPP-201ENST00000245816 PEBP4Q96S96 227 aa16.39■□□□□ 0.21
CLPP-201ENST00000245816 CHP1Q99653 195 aa16.39■□□□□ 0.21
CLPP-201ENST00000245816 HEPHQ9BQS7 1158 aa16.39■□□□□ 0.21
CLPP-201ENST00000245816 FTSJ1Q9UET6 329 aa16.39■□□□□ 0.21
CLPP-201ENST00000245816 PNMA8BQ9ULN7 279 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms