RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 ZDHHC7Q9NXF8 308 aa22.16■■□□□ 1.14
RNF39-201ENST00000244360 PPM1HQ9ULR3 514 aa22.16■■□□□ 1.14
RNF39-201ENST00000244360 PRG3Q9Y2Y8 225 aaPredicted RBP22.16■■□□□ 1.14
RNF39-201ENST00000244360 IGLV3-10A0A075B6K4 115 aa22.16■■□□□ 1.14
RNF39-201ENST00000244360 MS4A13Q5J8X5 152 aa22.16■■□□□ 1.14
RNF39-201ENST00000244360 RAPH1Q70E73 1250 aa22.16■■□□□ 1.14
RNF39-201ENST00000244360 DHDDSQ86SQ9 333 aa22.16■■□□□ 1.14
RNF39-201ENST00000244360 DENND6AQ8IWF6 608 aa22.16■■□□□ 1.14
RNF39-201ENST00000244360 ZNF781Q8N8C0 355 aa22.16■■□□□ 1.14
RNF39-201ENST00000244360 STYXQ8WUJ0 223 aa22.16■■□□□ 1.14
RNF39-201ENST00000244360 UBE2OQ9C0C9 1292 aaKnown RBP22.16■■□□□ 1.14
RNF39-201ENST00000244360 TASP1Q9H6P5 420 aa22.16■■□□□ 1.14
RNF39-201ENST00000244360 SLC2A6Q9UGQ3 507 aa22.16■■□□□ 1.14
RNF39-201ENST00000244360 MOXD2PA6NHM9 499 aa22.15■■□□□ 1.14
RNF39-201ENST00000244360 TARM1B6A8C7 271 aa22.15■■□□□ 1.14
RNF39-201ENST00000244360 PHGDHO43175 533 aaKnown RBP22.15■■□□□ 1.14
RNF39-201ENST00000244360 GRK4P32298 578 aa22.15■■□□□ 1.14
RNF39-201ENST00000244360 WNT3AP56704 352 aa22.15■■□□□ 1.14
RNF39-201ENST00000244360 MPP1Q00013 466 aa22.15■■□□□ 1.14
RNF39-201ENST00000244360 CDC16Q13042 620 aa22.15■■□□□ 1.14
RNF39-201ENST00000244360 MRPL58Q14197 206 aaKnown RBP22.15■■□□□ 1.14
RNF39-201ENST00000244360 METTL21CQ5VZV1 264 aa22.15■■□□□ 1.14
RNF39-201ENST00000244360 MFSD6LQ8IWD5 586 aa22.15■■□□□ 1.14
RNF39-201ENST00000244360 CENPLQ8N0S6 344 aaPredicted RBP22.15■■□□□ 1.14
RNF39-201ENST00000244360 C2CD4AQ8NCU7 369 aaPredicted RBP22.15■■□□□ 1.14
RNF39-201ENST00000244360 IMP4Q96G21 291 aaKnown RBP22.15■■□□□ 1.14
RNF39-201ENST00000244360 HHIPL1Q96JK4 782 aa22.15■■□□□ 1.14
RNF39-201ENST00000244360 PPP1R12CQ9BZL4 782 aa22.15■■□□□ 1.14
RNF39-201ENST00000244360 ZYG11BQ9C0D3 744 aa22.15■■□□□ 1.14
RNF39-201ENST00000244360 ABT1Q9ULW3 272 aaKnown RBP22.15■■□□□ 1.14
RNF39-201ENST00000244360 BUD23O43709 281 aaKnown RBP22.15■■□□□ 1.14
RNF39-201ENST00000244360 COL6A1P12109 1028 aa22.15■■□□□ 1.14
RNF39-201ENST00000244360 PAMP19021 973 aa22.15■■□□□ 1.14
RNF39-201ENST00000244360 TNK2Q07912 1038 aa22.15■■□□□ 1.14
RNF39-201ENST00000244360 VWA5B1Q5TIE3 1220 aa22.15■■□□□ 1.14
RNF39-201ENST00000244360 LIPMQ5VYY2 423 aa22.15■■□□□ 1.14
RNF39-201ENST00000244360 SLC30A9Q6PML9 568 aa22.15■■□□□ 1.14
RNF39-201ENST00000244360 SLC41A1Q8IVJ1 513 aa22.15■■□□□ 1.14
RNF39-201ENST00000244360 GLT1D1Q96MS3 346 aa22.15■■□□□ 1.14
RNF39-201ENST00000244360 TSNARE1Q96NA8 513 aa22.15■■□□□ 1.14
RNF39-201ENST00000244360 CLIC5Q9NZA1 410 aa22.15■■□□□ 1.14
RNF39-201ENST00000244360 CPSF2Q9P2I0 782 aaKnown RBP22.15■■□□□ 1.14
RNF39-201ENST00000244360 MRPL42Q9Y6G3 142 aaKnown RBP22.15■■□□□ 1.14
RNF39-201ENST00000244360 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.14■■□□□ 1.14
RNF39-201ENST00000244360 TK2O00142 265 aa22.14■■□□□ 1.14
RNF39-201ENST00000244360 SLC1A2P43004 574 aa22.14■■□□□ 1.14
RNF39-201ENST00000244360 NUMBP49757 651 aa22.14■■□□□ 1.14
RNF39-201ENST00000244360 RENBPP51606 427 aa22.14■■□□□ 1.14
RNF39-201ENST00000244360 RAB10P61026 200 aa22.14■■□□□ 1.14
RNF39-201ENST00000244360 CTBP1Q13363 440 aa22.14■■□□□ 1.14
RNF39-201ENST00000244360 CNGA3Q16281 694 aa22.14■■□□□ 1.14
RNF39-201ENST00000244360 SLC43A3Q8NBI5 491 aa22.14■■□□□ 1.14
RNF39-201ENST00000244360 HMCESQ96FZ2 354 aa22.14■■□□□ 1.14
RNF39-201ENST00000244360 RANBP9Q96S59 729 aa22.14■■□□□ 1.14
RNF39-201ENST00000244360 FTHL17Q9BXU8 183 aa22.14■■□□□ 1.14
RNF39-201ENST00000244360 DRC3Q9H069 523 aa22.14■■□□□ 1.14
RNF39-201ENST00000244360 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.14■■□□□ 1.14
RNF39-201ENST00000244360 COG4Q9H9E3 785 aa22.14■■□□□ 1.14
RNF39-201ENST00000244360 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.14■■□□□ 1.14
RNF39-201ENST00000244360 CDH22Q9UJ99 828 aa22.14■■□□□ 1.14
RNF39-201ENST00000244360 VWA8A3KMH1 1905 aa22.14■■□□□ 1.13
RNF39-201ENST00000244360 OR6C75A6NL08 312 aa22.14■■□□□ 1.13
RNF39-201ENST00000244360 ENO4A6NNW6 628 aa22.14■■□□□ 1.13
RNF39-201ENST00000244360 TADA2AO75478 443 aa22.14■■□□□ 1.13
RNF39-201ENST00000244360 LYNP07948 512 aa22.14■■□□□ 1.13
RNF39-201ENST00000244360 CHRNA4P43681 627 aa22.14■■□□□ 1.13
RNF39-201ENST00000244360 HK2P52789 917 aa22.14■■□□□ 1.13
RNF39-201ENST00000244360 USP4Q13107 963 aa22.14■■□□□ 1.13
RNF39-201ENST00000244360 TRIP4Q15650 581 aaPredicted RBP22.14■■□□□ 1.13
RNF39-201ENST00000244360 CFAP157Q5JU67 520 aa22.14■■□□□ 1.13
RNF39-201ENST00000244360 POU5F2Q8N7G0 328 aa22.14■■□□□ 1.13
RNF39-201ENST00000244360 KCTD4Q8WVF5 259 aa22.14■■□□□ 1.13
RNF39-201ENST00000244360 STON2Q8WXE9 905 aa22.14■■□□□ 1.13
RNF39-201ENST00000244360 GPR78Q96P69 363 aa22.14■■□□□ 1.13
RNF39-201ENST00000244360 VPS45Q9NRW7 570 aa22.14■■□□□ 1.13
RNF39-201ENST00000244360 TMEM161AQ9NX61 479 aa22.14■■□□□ 1.13
RNF39-201ENST00000244360 DOCK4Q8N1I0 1966 aa22.13■■□□□ 1.13
RNF39-201ENST00000244360 FAM95CA0A1B0GW59 222 aa22.13■■□□□ 1.13
RNF39-201ENST00000244360 UPP2O95045 317 aa22.13■■□□□ 1.13
RNF39-201ENST00000244360 RPL26P61254 145 aaKnown RBP22.13■■□□□ 1.13
RNF39-201ENST00000244360 CTXN3Q4LDR2 81 aa22.13■■□□□ 1.13
RNF39-201ENST00000244360 KIAA0408Q6ZU52 694 aa22.13■■□□□ 1.13
RNF39-201ENST00000244360 SLC25A41Q8N5S1 370 aa22.13■■□□□ 1.13
RNF39-201ENST00000244360 TTC9BQ8N6N2 239 aa22.13■■□□□ 1.13
RNF39-201ENST00000244360 ATP6V0D2Q8N8Y2 350 aa22.13■■□□□ 1.13
RNF39-201ENST00000244360 TDRD5Q8NAT2 981 aaKnown RBP22.13■■□□□ 1.13
RNF39-201ENST00000244360 BTN2A3PQ96KV6 586 aa22.13■■□□□ 1.13
RNF39-201ENST00000244360 FAM193BQ96PV7 902 aaPredicted RBP22.13■■□□□ 1.13
RNF39-201ENST00000244360 ARHGAP26Q9UNA1 814 aa22.13■■□□□ 1.13
RNF39-201ENST00000244360 ACOT9Q9Y305 439 aa22.13■■□□□ 1.13
RNF39-201ENST00000244360 RAP2CQ9Y3L5 183 aa22.13■■□□□ 1.13
RNF39-201ENST00000244360 LRRC8EQ6NSJ5 796 aa22.12■■□□□ 1.13
RNF39-201ENST00000244360 TFAP2DQ7Z6R9 452 aa22.12■■□□□ 1.13
RNF39-201ENST00000244360 CEP97Q8IW35 865 aa22.12■■□□□ 1.13
RNF39-201ENST00000244360 TEX26Q8N6G2 289 aa22.12■■□□□ 1.13
RNF39-201ENST00000244360 ATAD1Q8NBU5 361 aa22.12■■□□□ 1.13
RNF39-201ENST00000244360 GBP5Q96PP8 586 aa22.12■■□□□ 1.13
RNF39-201ENST00000244360 OLA1Q9NTK5 396 aaKnown RBP22.12■■□□□ 1.13
RNF39-201ENST00000244360 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.12■■□□□ 1.13
RNF39-201ENST00000244360 RUVBL2Q9Y230 463 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms