RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 FSD1LQ9BXM9 530 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 KCNN3Q9UGI6 736 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 A8MU76 341 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 H7C2Y5 167 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 APOC4-APOC2K7ER74 178 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 POLRMTO00411 1230 aaKnown RBP12.99□□□□□ -0.33
VAMP4-201ENST00000236192 DHFRP00374 187 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 APOC2P02655 101 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 IMPDH1P20839 514 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 PPP5CP53041 499 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 AP3M2P53677 418 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 VBP1P61758 197 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 RHDQ02161 417 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 EFR3AQ14156 821 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 DPY19L3Q6ZPD9 716 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 LINC00523Q86TU6 105 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 DNAJC10Q8IXB1 793 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 TAGAPQ8N103 731 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 TBC1D15Q8TC07 691 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 FAM45AQ8TCE6 357 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 PRR11Q96HE9 360 aaPredicted RBP12.99□□□□□ -0.33
VAMP4-201ENST00000236192 MED28Q9H204 178 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 EPB41L4BQ9H329 900 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 WDR70Q9NW82 654 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 RDH8Q9NYR8 311 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 HSFX1Q9UBD0 423 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 GABBR1Q9UBS5 961 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 PDGFRAP16234 1089 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 ZNF404Q494X3 552 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 DCAKDQ8WVC6 231 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 SH3KBP1Q96B97 665 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 FAM149B1Q96BN6 582 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 SH3YL1Q96HL8 342 aaPredicted RBP12.99□□□□□ -0.33
VAMP4-201ENST00000236192 MROQ9BYG7 248 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 SERHL2Q9H4I8 314 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 ACAD9Q9H845 621 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 SERHLQ9NQF3 203 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 EI24O14681 340 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 BUD23O43709 281 aaKnown RBP12.99□□□□□ -0.33
VAMP4-201ENST00000236192 ORC5O43913 435 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 ANGPTL1O95841 491 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 SERPINA1P01009 418 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 C8BP07358 591 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 SMIM18P0DKX4 95 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 MATN1P21941 496 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 CRKP46108 304 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 PDK2Q15119 407 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 ZSWIM7Q19AV6 140 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 ZNF667Q5HYK9 610 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 SPANXN3Q5MJ09 141 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 KIAA1841Q6NSI8 718 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 CYP20A1Q6UW02 462 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 DNAJC19Q96DA6 116 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 SLC4A9Q96Q91 983 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 PI4K2AQ9BTU6 479 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 MMP27Q9H306 513 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 EDARQ9UNE0 448 aa12.99□□□□□ -0.33
VAMP4-201ENST00000236192 KCNU1A8MYU2 1149 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 SSNA1O43805 119 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 PLOD3O60568 738 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 SEMA3AQ14563 771 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 ALFQ53S48 1182 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 REP15Q6BDI9 236 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 ANGPTL8Q6UXH0 198 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 DHRS9Q9BPW9 319 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 RBM4BQ9BQ04 359 aaKnown RBP12.98□□□□□ -0.33
VAMP4-201ENST00000236192 RBM4Q9BWF3 364 aaKnown RBP12.98□□□□□ -0.33
VAMP4-201ENST00000236192 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.98□□□□□ -0.33
VAMP4-201ENST00000236192 STON1Q9Y6Q2 735 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 SETD1BQ9UPS6 1966 aaKnown RBP12.98□□□□□ -0.33
VAMP4-201ENST00000236192 ATE1O95260 518 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 CST1P01037 141 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 NR3C2P08235 984 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 RBP1P09455 135 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 ABCG1P45844 678 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 TXNL4AP83876 142 aaKnown RBP12.98□□□□□ -0.33
VAMP4-201ENST00000236192 MAB21L1Q13394 359 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 LIPMQ5VYY2 423 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 CADM2Q8N3J6 435 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 NACC2Q96BF6 587 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 MAT2BQ9NZL9 334 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 ZNF624Q9P2J8 865 aaPredicted RBP12.98□□□□□ -0.33
VAMP4-201ENST00000236192 DUSP12Q9UNI6 340 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 USP31Q70CQ4 1352 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 ADAM23O75077 832 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 TADA2AO75478 443 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 ERP29P30040 261 aaKnown RBP12.98□□□□□ -0.33
VAMP4-201ENST00000236192 HOXA13P31271 388 aaPredicted RBP12.98□□□□□ -0.33
VAMP4-201ENST00000236192 GRIA2P42262 883 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 CCDC58Q4VC31 144 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 DEPDC4Q8N2C3 294 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 CHURC1Q8WUH1 139 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 TFB1MQ8WVM0 346 aaKnown RBP12.98□□□□□ -0.33
VAMP4-201ENST00000236192 CCDC120Q96HB5 630 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 MAGEB5Q9BZ81 275 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 DCSTAMPQ9H295 470 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 CD163L1Q9NR16 1453 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 FAM155BO75949 473 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 HLA-DRAP01903 254 aa12.98□□□□□ -0.33
VAMP4-201ENST00000236192 PTGER2P43116 358 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms