RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 LRRC38Q5VT99 294 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 LIPMQ5VYY2 423 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 ARCQ7LC44 396 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 HIPK1Q86Z02 1210 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 CDYL2Q8N8U2 506 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 RP9Q8TA86 221 aaKnown RBP13.5□□□□□ -0.25
NEK4-201ENST00000233027 PSMA8Q8TAA3 256 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 INPP4AQ96PE3 977 aaPredicted RBP13.5□□□□□ -0.25
NEK4-201ENST00000233027 XPR1Q9UBH6 696 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 CYP3A7-CYP3A51PA0A087WV96 503 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 PDE9AO76083 593 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 CST1P01037 141 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 CYP4B1P13584 511 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 CYP3A7P24462 503 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 GSTA3Q16772 222 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 TTC27Q6P3X3 843 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 PCSK9Q8NBP7 692 aaKnown RBP13.5□□□□□ -0.25
NEK4-201ENST00000233027 CLPTM1LQ96KA5 538 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 ACO2Q99798 780 aaKnown RBP13.5□□□□□ -0.25
NEK4-201ENST00000233027 CLEC4MQ9H2X3 399 aaPredicted RBP13.5□□□□□ -0.25
NEK4-201ENST00000233027 ARMC7Q9H6L4 198 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 IKZF3Q9UKT9 509 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 PREX1Q8TCU6 1659 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 BCLAF3A2AJT9 711 aaKnown RBP13.49□□□□□ -0.25
NEK4-201ENST00000233027 ACADMP11310 421 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 EPORP19235 508 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 HSPA14Q0VDF9 509 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 TOP3AQ13472 1001 aaPredicted RBP13.49□□□□□ -0.25
NEK4-201ENST00000233027 OFCC1Q8IZS5 231 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 GRIN3AQ8TCU5 1115 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 PCDHB18PQ96TA0 734 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 C12orf65Q9H3J6 166 aaKnown RBP13.49□□□□□ -0.25
NEK4-201ENST00000233027 PRDM12Q9H4Q4 367 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 MARCH2Q9P0N8 246 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 KANSL3Q9P2N6 904 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 RAP2CQ9Y3L5 183 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 DCDC2CA8MYV0 355 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 OR6B1O95007 311 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 ERBB2P04626 1255 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 SPATA31C1P0DKV0 1188 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 HIRAP54198 1017 aaPredicted RBP13.49□□□□□ -0.25
NEK4-201ENST00000233027 ZNF549Q6P9A3 640 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 TRABD2AQ86V40 505 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 ACE2Q9BYF1 805 aaPredicted RBP13.49□□□□□ -0.25
NEK4-201ENST00000233027 RHBGQ9H310 441 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 RAD21L1Q9H4I0 556 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 ACSS3Q9H6R3 686 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 RSL24D1Q9UHA3 163 aaKnown RBP13.49□□□□□ -0.25
NEK4-201ENST00000233027 LEF1Q9UJU2 399 aaPredicted RBP13.49□□□□□ -0.25
NEK4-201ENST00000233027 ADSSP30520 456 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 OAZ1P54368 228 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 CAPSQ13938 189 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 FNBP1LQ5T0N5 605 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 C9orf131Q5VYM1 1079 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 EIF3MQ7L2H7 374 aaKnown RBP13.49□□□□□ -0.25
NEK4-201ENST00000233027 IL31RAQ8NI17 732 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 ZNF398Q8TD17 642 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 SHC3Q92529 594 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 EMID1Q96A84 441 aaPredicted RBP13.49□□□□□ -0.25
NEK4-201ENST00000233027 GLIS2Q9BZE0 524 aaPredicted RBP13.49□□□□□ -0.25
NEK4-201ENST00000233027 ASB8Q9H765 288 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 ENOPH1Q9UHY7 261 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 FSCN2O14926 492 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 FGF10O15520 208 aaPredicted RBP13.49□□□□□ -0.25
NEK4-201ENST00000233027 EDF1O60869 148 aaKnown RBP13.49□□□□□ -0.25
NEK4-201ENST00000233027 TNFRSF21O75509 655 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 GTF2E2P29084 291 aaKnown RBP13.49□□□□□ -0.25
NEK4-201ENST00000233027 DRG2P55039 364 aaKnown RBP13.49□□□□□ -0.25
NEK4-201ENST00000233027 FSTL1Q12841 308 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 ACVR2BQ13705 512 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 GK5Q6ZS86 529 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 TRAPPC5Q8IUR0 188 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 JOSD2Q8TAC2 188 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 ADGRB2O60241 1585 aa13.49□□□□□ -0.25
NEK4-201ENST00000233027 SRRM3A6NNA2 597 aaPredicted RBP13.48□□□□□ -0.25
NEK4-201ENST00000233027 SEC24AO95486 1093 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 NUDT14O95848 222 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 CYP2A6P11509 494 aaPredicted RBP13.48□□□□□ -0.25
NEK4-201ENST00000233027 PTPN3P26045 913 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 USP46P62068 366 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 DACT2Q5SW24 774 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 CDC73Q6P1J9 531 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 ELMO1Q92556 727 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 EPB41L4BQ9H329 900 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 OGDHLQ9ULD0 1010 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 SLC12A4Q9UP95 1085 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 TRPV2Q9Y5S1 764 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 BIRC5O15392 142 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 B4GALT5O43286 388 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 RECQL5O94762 991 aaPredicted RBP13.48□□□□□ -0.25
NEK4-201ENST00000233027 LRATO95237 230 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 CLCN5P51795 746 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 SETMARQ53H47 684 aaPredicted RBP13.48□□□□□ -0.25
NEK4-201ENST00000233027 CELF3Q5SZQ8 465 aaKnown RBP13.48□□□□□ -0.25
NEK4-201ENST00000233027 ZNF671Q8TAW3 534 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 PTCD3Q96EY7 689 aaKnown RBP13.48□□□□□ -0.25
NEK4-201ENST00000233027 MRPL57Q9BQC6 102 aaKnown RBP13.48□□□□□ -0.25
NEK4-201ENST00000233027 LRRC4CQ9HCJ2 640 aa13.48□□□□□ -0.25
NEK4-201ENST00000233027 TNPO3Q9Y5L0 923 aaKnown RBP13.48□□□□□ -0.25
NEK4-201ENST00000233027 TMEM191CA6NGB0 347 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms