RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 LPGAT1Q92604 370 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 TRIM8Q9BZR9 551 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 MTMR10Q9NXD2 777 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 ERGIC3Q9Y282 383 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 CENPFP49454 3210 aa14.32□□□□□ -0.12
PCDHB3-201ENST00000231130 KIAA1217Q5T5P2 1943 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 GNAO1P09471 354 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 ACAT1P24752 427 aaKnown RBP14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 MAGEA3P43357 314 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 RABGGTBP53611 331 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 FKBP1AP62942 108 aaKnown RBP14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 PITX1P78337 314 aaPredicted RBP14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 SLC6A3Q01959 620 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 SEMA5AQ13591 1074 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 SURF1Q15526 300 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 AGKQ53H12 422 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 HERC6Q8IVU3 1022 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 RP9Q8TA86 221 aaKnown RBP14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 RPL10LQ96L21 214 aaKnown RBP14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 TAF4O00268 1085 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 MYCLP1P12525 358 aaPredicted RBP14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 PSME3P61289 254 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 ENPEPQ07075 957 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 DHRS4L2Q6PKH6 230 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 CHERPQ8IWX8 916 aaKnown RBP14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 EXOC8Q8IYI6 725 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 CGREF1Q99674 301 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 ACAD9Q9H845 621 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 WDR70Q9NW82 654 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 PADI4Q9UM07 663 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 PRPF19Q9UMS4 504 aaKnown RBP14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 COPG1Q9Y678 874 aaKnown RBP14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 GPC4O75487 556 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 IQCF3P0C7M6 154 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 CCNA2P20248 432 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 MAGP20916 626 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 GNL1P36915 607 aaPredicted RBP14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 HSDL1Q3SXM5 330 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 NCBP2-AS2Q69YL0 99 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 LYSMD3Q7Z3D4 306 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 IFNEQ86WN2 208 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 OR9I1Q8NGQ6 314 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 PPP1R13LQ8WUF5 828 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 MAELQ96JY0 434 aaKnown RBP14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 MRPL45Q9BRJ2 306 aaKnown RBP14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 ZNF670Q9BS34 389 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 BFARQ9NZS9 450 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 TLL2Q9Y6L7 1015 aa14.31□□□□□ -0.12
PCDHB3-201ENST00000231130 TNPO2O14787 897 aaKnown RBP14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 GABBR2O75899 941 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 GLDCP23378 1020 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 GRM3Q14832 879 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 SOWAHAQ2M3V2 549 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 NBPF12Q5TAG4 269 aaPredicted RBP14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 ZNF280DQ6N043 979 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 ILDR2Q71H61 639 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 PGAM4Q8N0Y7 254 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 ZNF567Q8N184 647 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 TTC16Q8NEE8 873 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 RTP4Q96DX8 246 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 TBCBQ99426 244 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 SH3GL1Q99961 368 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 VPS33BQ9H267 617 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 EGFL7Q9UHF1 273 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 VANGL2Q9ULK5 521 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 ERVK-11Q9UQG0 969 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 SLC27A5Q9Y2P5 690 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 NUP205Q92621 2012 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 GRIA3P42263 894 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 CTBP1Q13363 440 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 EFCAB12Q6NXP0 572 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 BTLAQ7Z6A9 289 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 PCYOX1LQ8NBM8 494 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 VPS39Q96JC1 886 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 RBBP8Q99708 897 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 CPNE1Q99829 537 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 SOX17Q9H6I2 414 aaPredicted RBP14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 GBA2Q9HCG7 927 aaPredicted RBP14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 RABL2AQ9UBK7 228 aaPredicted RBP14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 PPEF2O14830 753 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 MGEA5O60502 916 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 MT-ND1P03886 318 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 PFKMP08237 780 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 ZNF26P17031 533 aaPredicted RBP14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 ENDOUP21128 410 aaKnown RBP14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 NUMBP49757 651 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 EN1Q05925 392 aaPredicted RBP14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 LRP8Q14114 963 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 RAB39AQ14964 217 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 ANKRD26P1Q6NSI1 321 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 SLC41A1Q8IVJ1 513 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 KIF12Q96FN5 646 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 BCO2Q9BYV7 579 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 CXCL16Q9H2A7 254 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 SNX25Q9H3E2 840 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 DPEP3Q9H4B8 488 aa14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 MAP3K20Q9NYL2 800 aaKnown RBP14.3□□□□□ -0.12
PCDHB3-201ENST00000231130 XPR1Q9UBH6 696 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms