RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 UNC5BQ8IZJ1 945 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 METTL25Q8N6Q8 603 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 UBA3Q8TBC4 463 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 CERS2Q96G23 380 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 LRGUKQ96M69 825 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 LENG8Q96PV6 779 aaPredicted RBP20.82■□□□□ 0.92
SNX3-201ENST00000230085 SNX15Q9NRS6 342 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 GPATCH2LQ9NWQ4 482 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 RAP2CQ9Y3L5 183 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 HDAC3O15379 428 aa20.81■□□□□ 0.92
SNX3-201ENST00000230085 XPOTO43592 962 aaKnown RBP20.81■□□□□ 0.92
SNX3-201ENST00000230085 FAM58BPP0C7Q3 252 aa20.81■□□□□ 0.92
SNX3-201ENST00000230085 CTNNB1P35222 781 aa20.81■□□□□ 0.92
SNX3-201ENST00000230085 NDST1P52848 882 aa20.81■□□□□ 0.92
SNX3-201ENST00000230085 CSE1LP55060 971 aaKnown RBP20.81■□□□□ 0.92
SNX3-201ENST00000230085 CDO1Q16878 200 aa20.81■□□□□ 0.92
SNX3-201ENST00000230085 RBM12BQ8IXT5 1001 aaKnown RBP20.81■□□□□ 0.92
SNX3-201ENST00000230085 CNTD1Q8N815 330 aa20.81■□□□□ 0.92
SNX3-201ENST00000230085 HASPINQ8TF76 798 aa20.81■□□□□ 0.92
SNX3-201ENST00000230085 DUS3LQ96G46 650 aaKnown RBP20.81■□□□□ 0.92
SNX3-201ENST00000230085 HPDLQ96IR7 371 aa20.81■□□□□ 0.92
SNX3-201ENST00000230085 ZNF558Q96NG5 402 aa20.81■□□□□ 0.92
SNX3-201ENST00000230085 TMEM175Q9BSA9 504 aa20.81■□□□□ 0.92
SNX3-201ENST00000230085 ZCWPW1Q9H0M4 648 aa20.81■□□□□ 0.92
SNX3-201ENST00000230085 MRM3Q9HC36 420 aaKnown RBP20.81■□□□□ 0.92
SNX3-201ENST00000230085 PSAT1Q9Y617 370 aa20.81■□□□□ 0.92
SNX3-201ENST00000230085 HSPA4LO95757 839 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 ITGB1P05556 798 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 ERFP50548 548 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 ERVK-21P61565 698 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 DPYSQ14117 519 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 HABP4Q5JVS0 413 aaKnown RBP20.8■□□□□ 0.92
SNX3-201ENST00000230085 STRADAQ7RTN6 431 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 DSELQ8IZU8 1212 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 ZNF781Q8N8C0 355 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 C3orf58Q8NDZ4 430 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 MIPOL1Q8TD10 442 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 DRC3Q9H069 523 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 ILKAPQ9H0C8 392 aaPredicted RBP20.8■□□□□ 0.92
SNX3-201ENST00000230085 UTP6Q9NYH9 597 aaKnown RBP20.8■□□□□ 0.92
SNX3-201ENST00000230085 TXNDC16Q9P2K2 825 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 ANKRD6Q9Y2G4 727 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 TXNDC9O14530 226 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 PPEF2O14830 753 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 B3GAT3O94766 335 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 PGM3O95394 542 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 IMPDH2P12268 514 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 LRPAP1P30533 357 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 TXNL4AP83876 142 aaKnown RBP20.8■□□□□ 0.92
SNX3-201ENST00000230085 CYLC2Q14093 348 aaPredicted RBP20.8■□□□□ 0.92
SNX3-201ENST00000230085 FLOT2Q14254 428 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 SLC9B1Q4ZJI4 515 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 VWA5B1Q5TIE3 1220 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 ARHGAP17Q68EM7 881 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 SCYL2Q6P3W7 929 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 TMEM135Q86UB9 458 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 KLHL23Q8NBE8 558 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 ZFP28Q8NHY6 868 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 BCL7CQ8WUZ0 217 aaPredicted RBP20.8■□□□□ 0.92
SNX3-201ENST00000230085 NMD3Q96D46 503 aaKnown RBP20.8■□□□□ 0.92
SNX3-201ENST00000230085 IL22Q9GZX6 179 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 MRPL40Q9NQ50 206 aaKnown RBP20.8■□□□□ 0.92
SNX3-201ENST00000230085 OXSMQ9NWU1 459 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 GALNT8Q9NY28 637 aa20.8■□□□□ 0.92
SNX3-201ENST00000230085 SCN1AP35498 2009 aa20.79■□□□□ 0.92
SNX3-201ENST00000230085 GOLGA8QA0A0J9YX86 632 aa20.79■□□□□ 0.92
SNX3-201ENST00000230085 GOLGA8OA6NCC3 632 aa20.79■□□□□ 0.92
SNX3-201ENST00000230085 GOLGA8NF8WBI6 632 aa20.79■□□□□ 0.92
SNX3-201ENST00000230085 PAPSS1O43252 624 aaPredicted RBP20.79■□□□□ 0.92
SNX3-201ENST00000230085 PYGLP06737 847 aa20.79■□□□□ 0.92
SNX3-201ENST00000230085 SRGAP2BP0DMP2 458 aa20.79■□□□□ 0.92
SNX3-201ENST00000230085 RPL9P32969 192 aaKnown RBP20.79■□□□□ 0.92
SNX3-201ENST00000230085 PPARGP37231 505 aaPredicted RBP20.79■□□□□ 0.92
SNX3-201ENST00000230085 INHBCP55103 352 aa20.79■□□□□ 0.92
SNX3-201ENST00000230085 RBP5P82980 135 aa20.79■□□□□ 0.92
SNX3-201ENST00000230085 C9orf57Q5W0N0 161 aa20.79■□□□□ 0.92
SNX3-201ENST00000230085 PMF1Q6P1K2 205 aa20.79■□□□□ 0.92
SNX3-201ENST00000230085 DHRS4L2Q6PKH6 230 aa20.79■□□□□ 0.92
SNX3-201ENST00000230085 SLC39A11Q8N1S5 342 aa20.79■□□□□ 0.92
SNX3-201ENST00000230085 TDRD5Q8NAT2 981 aaKnown RBP20.79■□□□□ 0.92
SNX3-201ENST00000230085 UROC1Q96N76 676 aa20.79■□□□□ 0.92
SNX3-201ENST00000230085 ZNF576Q9H609 170 aa20.79■□□□□ 0.92
SNX3-201ENST00000230085 IRAK4Q9NWZ3 460 aa20.79■□□□□ 0.92
SNX3-201ENST00000230085 MARCH5Q9NX47 278 aa20.79■□□□□ 0.92
SNX3-201ENST00000230085 CHCHD3Q9NX63 227 aaKnown RBP20.79■□□□□ 0.92
SNX3-201ENST00000230085 AP4E1Q9UPM8 1137 aa20.79■□□□□ 0.92
SNX3-201ENST00000230085 RWDD3Q9Y3V2 267 aa20.79■□□□□ 0.92
SNX3-201ENST00000230085 RAD54BQ9Y620 910 aa20.79■□□□□ 0.92
SNX3-201ENST00000230085 LOC100653049A0A140TA62 436 aa20.78■□□□□ 0.92
SNX3-201ENST00000230085 C5orf67F2Z3F1 127 aa20.78■□□□□ 0.92
SNX3-201ENST00000230085 ACOT8O14734 319 aa20.78■□□□□ 0.92
SNX3-201ENST00000230085 TIMM44O43615 452 aa20.78■□□□□ 0.92
SNX3-201ENST00000230085 KRT34O76011 436 aa20.78■□□□□ 0.92
SNX3-201ENST00000230085 ME2P23368 584 aa20.78■□□□□ 0.92
SNX3-201ENST00000230085 MGAT1P26572 445 aa20.78■□□□□ 0.92
SNX3-201ENST00000230085 RANBP1P43487 201 aa20.78■□□□□ 0.92
SNX3-201ENST00000230085 THOP1P52888 689 aa20.78■□□□□ 0.92
SNX3-201ENST00000230085 NSUN2Q08J23 767 aaKnown RBP eCLIP20.78■□□□□ 0.92
SNX3-201ENST00000230085 ORC1Q13415 861 aa20.78■□□□□ 0.92
SNX3-201ENST00000230085 GOLGA7BQ2TAP0 167 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms