RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 CCNYL1Q8N7R7 359 aa16.46■□□□□ 0.23
LTBR-201ENST00000228918 TXNDC5Q8NBS9 432 aaKnown RBP16.46■□□□□ 0.23
LTBR-201ENST00000228918 FAM105AQ9NUU6 356 aa16.46■□□□□ 0.23
LTBR-201ENST00000228918 ARHGEF38Q9NXL2 777 aa16.46■□□□□ 0.23
LTBR-201ENST00000228918 SLC2A6Q9UGQ3 507 aa16.46■□□□□ 0.23
LTBR-201ENST00000228918 BCAP29Q9UHQ4 241 aa16.46■□□□□ 0.23
LTBR-201ENST00000228918 C15orf38-AP3S2A0A0A6YYH1 394 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 CFLARO15519 480 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 MAFKO60675 156 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 PABPC4LP0CB38 370 aaKnown RBP16.45■□□□□ 0.22
LTBR-201ENST00000228918 ZNF865P0CJ78 1059 aaPredicted RBP16.45■□□□□ 0.22
LTBR-201ENST00000228918 HOXC13P31276 330 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 CPT1AP50416 773 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 TAS2R39P59534 338 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 BEX3Q00994 111 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 EIF4EBP2Q13542 120 aaPredicted RBP16.45■□□□□ 0.22
LTBR-201ENST00000228918 IRF5Q13568 498 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 RARS2Q5T160 578 aaKnown RBP16.45■□□□□ 0.22
LTBR-201ENST00000228918 ARPINQ7Z6K5 226 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 SCML4Q8N228 414 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 MARVELD2Q8N4S9 558 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 C2CD4AQ8NCU7 369 aaPredicted RBP16.45■□□□□ 0.22
LTBR-201ENST00000228918 USP13Q92995 863 aaPredicted RBP16.45■□□□□ 0.22
LTBR-201ENST00000228918 OMDQ99983 421 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 MRPL57Q9BQC6 102 aaKnown RBP16.45■□□□□ 0.22
LTBR-201ENST00000228918 UNKQ9C0B0 810 aaKnown RBP16.45■□□□□ 0.22
LTBR-201ENST00000228918 UBE2OQ9C0C9 1292 aaKnown RBP16.45■□□□□ 0.22
LTBR-201ENST00000228918 SIK2Q9H0K1 926 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 TREX1Q9NSU2 369 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 PATJQ8NI35 1801 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 SDHDO14521 159 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 DENRO43583 198 aaKnown RBP16.45■□□□□ 0.22
LTBR-201ENST00000228918 ME2P23368 584 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 CD151P48509 253 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 GEMP55040 296 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 MS4A2Q01362 244 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 TLR1Q15399 786 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 C9orf131Q5VYM1 1079 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 PIWIL4Q7Z3Z4 852 aaKnown RBP16.45■□□□□ 0.22
LTBR-201ENST00000228918 TICAM1Q8IUC6 712 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 BHLHE22Q8NFJ8 381 aaPredicted RBP16.45■□□□□ 0.22
LTBR-201ENST00000228918 LPPQ93052 612 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 ELMO2Q96JJ3 720 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 LRGUKQ96M69 825 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 PARK7Q99497 189 aaKnown RBP16.45■□□□□ 0.22
LTBR-201ENST00000228918 PAAF1Q9BRP4 392 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 ZCWPW1Q9H0M4 648 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 EFCAB1Q9HAE3 211 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 NCKIPSDQ9NZQ3 722 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.45■□□□□ 0.22
LTBR-201ENST00000228918 PTPRDP23468 1912 aa16.45■□□□□ 0.22
LTBR-201ENST00000228918 A0A087X1B8 175 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 TCAF2A6NFQ2 919 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 CASTOR2A6NHX0 329 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 TRPC5OSA6NMA1 111 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 PDLIM1O00151 329 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 MATN3O15232 486 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 IRAK2O43187 625 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 HLA-DQB2P05538 268 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 BDNFP23560 247 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 MSX2P35548 267 aaPredicted RBP16.44■□□□□ 0.22
LTBR-201ENST00000228918 DNAJB13P59910 316 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 ART3Q13508 389 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 CNGA3Q16281 694 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 TIGD5Q53EQ6 642 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 SH2D4BQ5SQS7 431 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 MANEALQ5VSG8 457 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 ZNF470Q6ECI4 717 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 KIAA0930Q6ICG6 404 aaPredicted RBP16.44■□□□□ 0.22
LTBR-201ENST00000228918 FAM81AQ8TBF8 368 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 HEXDCQ8WVB3 486 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 DLG3Q92796 817 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 DTNBP1Q96EV8 351 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 SLC39A8Q9C0K1 460 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 POMKQ9H5K3 350 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 ZNF408Q9H9D4 720 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 ENTPD7Q9NQZ7 604 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 CLIC5Q9NZA1 410 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 FLRT1Q9NZU1 646 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 STX16-NPEPL1H3BU86 382 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 FGF10O15520 208 aaPredicted RBP16.44■□□□□ 0.22
LTBR-201ENST00000228918 DNAJA2O60884 412 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 BCAS2O75934 225 aaPredicted RBP16.44■□□□□ 0.22
LTBR-201ENST00000228918 PYGLP06737 847 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 SMIM18P0DKX4 95 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 HSPA1AP0DMV8 641 aaKnown RBP16.44■□□□□ 0.22
LTBR-201ENST00000228918 HSPA1BP0DMV9 641 aaKnown RBP16.44■□□□□ 0.22
LTBR-201ENST00000228918 SCNN1GP51170 649 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 KPNA2P52292 529 aaKnown RBP16.44■□□□□ 0.22
LTBR-201ENST00000228918 FAM171BQ6P995 826 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 PELI3Q8N2H9 469 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 RNF148Q8N7C7 305 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 CATSPER1Q8NEC5 780 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 KATNAL1Q9BW62 490 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 DMAP1Q9NPF5 467 aaPredicted RBP16.44■□□□□ 0.22
LTBR-201ENST00000228918 SLC4A7Q9Y6M7 1214 aa16.44■□□□□ 0.22
LTBR-201ENST00000228918 PRSS51A0A1B0GVH4 220 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 ARL5CA6NH57 179 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 PAMP19021 973 aa16.43■□□□□ 0.22
LTBR-201ENST00000228918 ATP5F1P24539 256 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms