RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 SERPINB1P30740 379 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 GALK2Q01415 458 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 BST1Q10588 318 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 JADE1Q6IE81 842 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 ADGRD1Q6QNK2 874 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 GPRC5AQ8NFJ5 357 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 AFG1LQ8WV93 481 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 UPF1Q92900 1129 aaKnown RBP eCLIP13.78□□□□□ -0.2
GABPB1-201ENST00000220429 ACSF2Q96CM8 615 aaPredicted RBP13.78□□□□□ -0.2
GABPB1-201ENST00000220429 VMP1Q96GC9 406 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 CPB2Q96IY4 423 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 TWNKQ96RR1 684 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 EMILIN2Q9BXX0 1053 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 PDZD7Q9H5P4 517 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 MAGEE1Q9HCI5 957 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 SLC27A5Q9Y2P5 690 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 PCM1Q15154 2024 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 hCG_2039718K7EN88 272 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 DYRK3O43781 588 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 VTNP04004 478 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 ITGB3P05106 788 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 GSTM1P09488 218 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 ZNF286BP0CG31 522 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 YWHAEP62258 255 aaKnown RBP13.78□□□□□ -0.2
GABPB1-201ENST00000220429 TMPRSS15P98073 1019 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 IFITM3Q01628 133 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 POU5F1BQ06416 359 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 FCHO2Q0JRZ9 810 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 MGAT5BQ3V5L5 792 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 LDLRAP1Q5SW96 308 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.78□□□□□ -0.2
GABPB1-201ENST00000220429 ZFYVE27Q5T4F4 411 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 LRRC38Q5VT99 294 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 ZCCHC8Q6NZY4 707 aaKnown RBP13.78□□□□□ -0.2
GABPB1-201ENST00000220429 CRLF3Q8IUI8 442 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.78□□□□□ -0.2
GABPB1-201ENST00000220429 AKT3Q9Y243 479 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 H3BUI4 141 aa13.77□□□□□ -0.2
GABPB1-201ENST00000220429 SGTAO43765 313 aa13.77□□□□□ -0.2
GABPB1-201ENST00000220429 MT-ND3P03897 115 aa13.77□□□□□ -0.2
GABPB1-201ENST00000220429 ATF7P17544 494 aaPredicted RBP13.77□□□□□ -0.2
GABPB1-201ENST00000220429 KLRC2P26717 231 aa13.77□□□□□ -0.2
GABPB1-201ENST00000220429 WEE1P30291 646 aa13.77□□□□□ -0.2
GABPB1-201ENST00000220429 ADCYAP1R1P41586 468 aa13.77□□□□□ -0.2
GABPB1-201ENST00000220429 GRIA3P42263 894 aa13.77□□□□□ -0.2
GABPB1-201ENST00000220429 FAM122CQ6P4D5 195 aa13.77□□□□□ -0.2
GABPB1-201ENST00000220429 SPOCD1Q6ZMY3 1216 aa13.77□□□□□ -0.2
GABPB1-201ENST00000220429 SNX29P2Q8IUI4 249 aa13.77□□□□□ -0.2
GABPB1-201ENST00000220429 BEND7Q8N7W2 519 aaPredicted RBP13.77□□□□□ -0.2
GABPB1-201ENST00000220429 NIPA2Q8N8Q9 360 aa13.77□□□□□ -0.2
GABPB1-201ENST00000220429 FAM47BQ8NA70 645 aa13.77□□□□□ -0.2
GABPB1-201ENST00000220429 FIG4Q92562 907 aa13.77□□□□□ -0.2
GABPB1-201ENST00000220429 TRIM63Q969Q1 353 aa13.77□□□□□ -0.2
GABPB1-201ENST00000220429 SLC10A4Q96EP9 437 aa13.77□□□□□ -0.2
GABPB1-201ENST00000220429 WDR12Q9GZL7 423 aaKnown RBP13.77□□□□□ -0.2
GABPB1-201ENST00000220429 KATNBL1Q9H079 304 aa13.77□□□□□ -0.2
GABPB1-201ENST00000220429 SP140LQ9H930 580 aa13.77□□□□□ -0.2
GABPB1-201ENST00000220429 SUCOQ9UBS9 1254 aaKnown RBP13.77□□□□□ -0.2
GABPB1-201ENST00000220429 DNPEPQ9ULA0 475 aa13.77□□□□□ -0.2
GABPB1-201ENST00000220429 VANGL2Q9ULK5 521 aa13.77□□□□□ -0.2
GABPB1-201ENST00000220429 ARHGAP26Q9UNA1 814 aa13.77□□□□□ -0.2
GABPB1-201ENST00000220429 POLHQ9Y253 713 aa13.77□□□□□ -0.2
GABPB1-201ENST00000220429 PRSS51A0A1B0GVH4 220 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 GOLGA8SH3BPF8 625 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 AURKAO14965 403 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 LIASO43766 372 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 PTPN1P18031 435 aaKnown RBP13.77□□□□□ -0.21
GABPB1-201ENST00000220429 ARF4P18085 180 aaPredicted RBP13.77□□□□□ -0.21
GABPB1-201ENST00000220429 MLLT6P55198 1093 aaPredicted RBP13.77□□□□□ -0.21
GABPB1-201ENST00000220429 TAP1Q03518 808 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 FLOT2Q14254 428 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 PIGHQ14442 188 aaPredicted RBP13.77□□□□□ -0.21
GABPB1-201ENST00000220429 PPP2R5DQ14738 602 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 C6orf10Q5SRN2 563 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 ADAMTSL2Q86TH1 951 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 HERC6Q8IVU3 1022 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 TMEM102Q8N9M5 508 aaPredicted RBP13.77□□□□□ -0.21
GABPB1-201ENST00000220429 GLIS1Q8NBF1 620 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 SLC4A11Q8NBS3 891 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 PPTC7Q8NI37 304 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 JOSD2Q8TAC2 188 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 CMTM5Q96DZ9 223 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 APOPT1Q96IL0 206 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 PAFAH2Q99487 392 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 SYT17Q9BSW7 474 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 ANKRD60Q9BZ19 345 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 LHX5Q9H2C1 402 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 COQ10BQ9H8M1 238 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 ZNF395Q9H8N7 513 aaPredicted RBP13.77□□□□□ -0.21
GABPB1-201ENST00000220429 FAM25EA8MYX2 175 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 PLOD2O00469 737 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 CCNCP24863 283 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 GBE1Q04446 702 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 OCA2Q04671 838 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 SLC10A6Q3KNW5 377 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 SNAP47Q5SQN1 464 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 NDUFAF5Q5TEU4 345 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 ZNF786Q8N393 782 aa13.77□□□□□ -0.21
GABPB1-201ENST00000220429 METTL2AQ96IZ6 378 aaKnown RBP13.77□□□□□ -0.21
GABPB1-201ENST00000220429 C16orf70Q9BSU1 422 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms