RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 AP2A1O95782 977 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 HAPLN1P10915 354 aaPredicted RBP9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 MLNP12872 115 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 PGAM1P18669 254 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 NFKBIAP25963 317 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 OR1E1P30953 314 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 TUFMP49411 452 aaKnown RBP9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 PLOD1Q02809 727 aaPredicted RBP9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 OTOP2Q7RTS6 562 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 ZNF554Q86TJ5 538 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 C11orf74Q86VG3 221 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 CFAP52Q8N1V2 620 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 DCLK2Q8N568 766 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 SLC25A41Q8N5S1 370 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 AUTS2Q8WXX7 1259 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 BTN2A3PQ96KV6 586 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 TEKT5Q96M29 485 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 ZNF558Q96NG5 402 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 CCT7Q99832 543 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 ZBED2Q9BTP6 218 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 C2orf49Q9BVC5 232 aaPredicted RBP9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 ZYG11BQ9C0D3 744 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 GBA3Q9H227 469 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 DENND2DQ9H6A0 471 aaPredicted RBP9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 LRRC40Q9H9A6 602 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 NT5MQ9NPB1 228 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 AASDHPPTQ9NRN7 309 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 ZFP69BQ9UJL9 534 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 SHROOM3Q8TF72 1996 aa9.02□□□□□ -0.96
MTHFD1-201ENST00000216605 PRPF4O43172 522 aaKnown RBP eCLIP9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 EDF1O60869 148 aaKnown RBP9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 ENTPD5O75356 428 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 CNTN5O94779 1100 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 T-ENOLP0DO92 83 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 GM2AP17900 193 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 ATP5C1P36542 298 aaKnown RBP9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 MAGEA6P43360 314 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 MAXP61244 160 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 GSTM4Q03013 218 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 PLD1Q13393 1074 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 POU6F1Q14863 301 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 VEPH1Q14D04 833 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 PDK4Q16654 411 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 ANO4Q32M45 955 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 PIK3R6Q5UE93 754 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 TIGD7Q6NT04 549 aaPredicted RBP9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 BEND5Q7L4P6 421 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 CCNJLQ8IV13 435 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 LGI2Q8N0V4 545 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 RTL3Q8N8U3 475 aaKnown RBP9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 PBXIP1Q96AQ6 731 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 KLHL5Q96PQ7 755 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 NAT9Q9BTE0 207 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 IER2Q9BTL4 223 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 FICDQ9BVA6 458 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 TRPC7Q9HCX4 862 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 SMYD2Q9NRG4 433 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 C20orf96Q9NUD7 363 aaPredicted RBP9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 EURLQ9NYK6 297 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 TMCC3Q9ULS5 477 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 AAR2Q9Y312 384 aaKnown RBP9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 CCDC22O60826 627 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 ANXA9O76027 345 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 URODP06132 367 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 F7P08709 466 aaPredicted RBP9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 CLTBP09497 229 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 SPATA31D3P0C874 917 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 CSF2RAP15509 400 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 SP100P23497 879 aaPredicted RBP9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 CCNCP24863 283 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 ABCG1P45844 678 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 HARS2P49590 506 aaKnown RBP9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 SMARCB1Q12824 385 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 MRPL58Q14197 206 aaKnown RBP9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 MS4A13Q5J8X5 152 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 GRAMD4Q6IC98 578 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 CNKSR3Q6P9H4 555 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 RFWD3Q6PCD5 774 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 SPATA31D4Q6ZUB0 917 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 KIAA1958Q8N8K9 716 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 ATP2A3Q93084 1043 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 IGSF21Q96ID5 467 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 VPS11Q9H270 941 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 SLCO1B3Q9NPD5 702 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 EIF2B3Q9NR50 452 aaKnown RBP9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 SMPD4Q9NXE4 827 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 FETUBQ9UGM5 382 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 LNPEPQ9UIQ6 1025 aa9.02□□□□□ -0.97
MTHFD1-201ENST00000216605 CCDC195A0A1B0GUA6 201 aa9.01□□□□□ -0.97
MTHFD1-201ENST00000216605 F5H5T6 163 aa9.01□□□□□ -0.97
MTHFD1-201ENST00000216605 CBX6O95503 412 aa9.01□□□□□ -0.97
MTHFD1-201ENST00000216605 IGLV3-25P01717 112 aa9.01□□□□□ -0.97
MTHFD1-201ENST00000216605 HSPA1AP0DMV8 641 aaKnown RBP9.01□□□□□ -0.97
MTHFD1-201ENST00000216605 HSPA1BP0DMV9 641 aaKnown RBP9.01□□□□□ -0.97
MTHFD1-201ENST00000216605 TYK2P29597 1187 aa9.01□□□□□ -0.97
MTHFD1-201ENST00000216605 DNAJA1P31689 397 aaKnown RBP9.01□□□□□ -0.97
MTHFD1-201ENST00000216605 CD68P34810 354 aaPredicted RBP9.01□□□□□ -0.97
MTHFD1-201ENST00000216605 KCNQ1P51787 676 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms