RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 TUBB2BQ9BVA1 445 aa20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 FAM126AQ9BYI3 521 aaPredicted RBP20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 FEZ2Q9UHY8 353 aaPredicted RBP20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 PPM1HQ9ULR3 514 aa20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 DRG1Q9Y295 367 aaKnown RBP20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 CCDC163A0A0D9SF12 145 aa20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 K7ESF4 209 aa20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 KPNA3O00505 521 aaPredicted RBP20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 PHF2O75151 1096 aa20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 ZNF217O75362 1048 aa20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 LEFTY1O75610 366 aa20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 SERPINF2P08697 491 aa20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 RPS14P62263 151 aaKnown RBP20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 CSTF1Q05048 431 aaKnown RBP20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 BCL2L1Q07817 233 aa20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 ARSIQ5FYB1 569 aa20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 ARHGEF18Q6ZSZ5 1173 aa20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 PGBD5Q8N414 524 aa20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 GANCQ8TET4 914 aa20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 ZNF641Q96N77 438 aaPredicted RBP20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 SPATA13Q96N96 652 aa20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 PRRX2Q99811 253 aa20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 LRFN3Q9BTN0 628 aa20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 C10orf88Q9H8K7 445 aa20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 SMARCAL1Q9NZC9 954 aa20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 NCKAP1Q9Y2A7 1128 aa20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 WASF2Q9Y6W5 498 aa20.44■□□□□ 0.86
RHBDD3-201ENST00000216085 C5orf60A6NFR6 353 aa20.43■□□□□ 0.86
RHBDD3-201ENST00000216085 ESPNB1AK53 854 aa20.43■□□□□ 0.86
RHBDD3-201ENST00000216085 CR2P20023 1033 aa20.43■□□□□ 0.86
RHBDD3-201ENST00000216085 SLC8A1P32418 973 aa20.43■□□□□ 0.86
RHBDD3-201ENST00000216085 TNNT3P45378 269 aaPredicted RBP20.43■□□□□ 0.86
RHBDD3-201ENST00000216085 RGRP47804 291 aa20.43■□□□□ 0.86
RHBDD3-201ENST00000216085 FNTAP49354 379 aa20.43■□□□□ 0.86
RHBDD3-201ENST00000216085 CYP1B1Q16678 543 aa20.43■□□□□ 0.86
RHBDD3-201ENST00000216085 P3H1Q32P28 736 aa20.43■□□□□ 0.86
RHBDD3-201ENST00000216085 GDPD4Q6W3E5 623 aa20.43■□□□□ 0.86
RHBDD3-201ENST00000216085 KBTBD6Q86V97 674 aa20.43■□□□□ 0.86
RHBDD3-201ENST00000216085 ZNF567Q8N184 647 aa20.43■□□□□ 0.86
RHBDD3-201ENST00000216085 GRK7Q8WTQ7 553 aa20.43■□□□□ 0.86
RHBDD3-201ENST00000216085 ZNF419Q96HQ0 510 aaPredicted RBP20.43■□□□□ 0.86
RHBDD3-201ENST00000216085 RUNDC3BQ96NL0 473 aa20.43■□□□□ 0.86
RHBDD3-201ENST00000216085 OMDQ99983 421 aa20.43■□□□□ 0.86
RHBDD3-201ENST00000216085 SLC25A51Q9H1U9 297 aa20.43■□□□□ 0.86
RHBDD3-201ENST00000216085 USP29Q9HBJ7 922 aa20.43■□□□□ 0.86
RHBDD3-201ENST00000216085 GLOD4Q9HC38 313 aa20.43■□□□□ 0.86
RHBDD3-201ENST00000216085 RSPH14Q9UHP6 348 aa20.43■□□□□ 0.86
RHBDD3-201ENST00000216085 KMT2EQ8IZD2 1858 aa20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 A0A1W2PQ67 120 aa20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 GOLGA6CA6NDK9 693 aa20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 GOLGA6BA6NDN3 693 aa20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 CCDC188H7C350 402 aa20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 AXIN1O15169 862 aa20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 GALR2O43603 387 aaPredicted RBP20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 SOCS5O75159 536 aa20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 IFNB1P01574 187 aa20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 UGT2B4P06133 528 aa20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 GOLGA6DP0CG33 693 aa20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 PRPSAP1Q14558 356 aa20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 ANGPT1Q15389 498 aa20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 ANKRD20A2Q5SQ80 823 aa20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 ANKRD20A1Q5TYW2 823 aa20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 ANKRD20A3Q5VUR7 823 aa20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 CNTD1Q8N815 330 aa20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 ATL2Q8NHH9 583 aa20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 LRRC45Q96CN5 670 aa20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 SPACA7Q96KW9 195 aa20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 PABPC3Q9H361 631 aaKnown RBP20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 NOD2Q9HC29 1040 aa20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 GOLGA6AQ9NYA3 693 aa20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 CDC23Q9UJX2 597 aa20.42■□□□□ 0.86
RHBDD3-201ENST00000216085 MID1O15344 667 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 CTSLP07711 333 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 C7P10643 843 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 ITGB7P26010 798 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 DSC2Q02487 901 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 ZNF528Q3MIS6 628 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 ZNF805Q5CZA5 627 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 NCEH1Q6PIU2 408 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 CCDC137Q6PK04 289 aaKnown RBP20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 USP30Q70CQ3 517 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 RTP4Q96DX8 246 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 GBA3Q9H227 469 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 ZNF500O60304 480 aaPredicted RBP20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 GCATO75600 419 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 GAS8O95995 478 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 NFKBIAP25963 317 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 GKP32189 559 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 SLC14A2Q15849 920 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 WHAMMP3Q1A5X7 153 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 USP39Q53GS9 565 aaKnown RBP20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 TSSK4Q6SA08 328 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 C4orf22Q6V702 233 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 LONP2Q86WA8 852 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 HCAR2Q8TDS4 363 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 SLC6A17Q9H1V8 727 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 SUV39H2Q9H5I1 410 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 VPS45Q9NRW7 570 aa20.41■□□□□ 0.86
RHBDD3-201ENST00000216085 CACNA1IQ9P0X4 2223 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms