RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 PIGFQ07326 219 aa16.93■□□□□ 0.3
CTDP1-201ENST00000075430 ZFP1Q6P2D0 407 aa16.93■□□□□ 0.3
CTDP1-201ENST00000075430 DHFR2Q86XF0 187 aa16.93■□□□□ 0.3
CTDP1-201ENST00000075430 ZMAT2Q96NC0 199 aaKnown RBP16.93■□□□□ 0.3
CTDP1-201ENST00000075430 CNOT6Q9ULM6 557 aaKnown RBP16.93■□□□□ 0.3
CTDP1-201ENST00000075430 PPP6CO00743 305 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 MAGEA3P43357 314 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 IREB2P48200 963 aaKnown RBP16.92■□□□□ 0.3
CTDP1-201ENST00000075430 TAS2R39P59534 338 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 ZBTB17Q13105 803 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 PLA2G4EQ3MJ16 856 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 RBM38Q9H0Z9 239 aaKnown RBP16.92■□□□□ 0.3
CTDP1-201ENST00000075430 ZBTB26Q9HCK0 441 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 FAM95CA0A1B0GW59 222 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 BCAS2O75934 225 aaPredicted RBP16.92■□□□□ 0.3
CTDP1-201ENST00000075430 ATE1O95260 518 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 OCM2P0CE71 109 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 OCMP0CE72 109 aaPredicted RBP16.92■□□□□ 0.3
CTDP1-201ENST00000075430 PTPN3P26045 913 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 C1QTNF8P60827 252 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 YBX1P67809 324 aaKnown RBP16.92■□□□□ 0.3
CTDP1-201ENST00000075430 TTLL4Q14679 1199 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 CATSPER4Q7RTX7 472 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 DPP9Q86TI2 863 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 TMEM102Q8N9M5 508 aaPredicted RBP16.92■□□□□ 0.3
CTDP1-201ENST00000075430 HBEGFQ99075 208 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 EFHD1Q9BUP0 239 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 SMARCAD1Q9H4L7 1026 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 STN1Q9H668 368 aaKnown RBP16.92■□□□□ 0.3
CTDP1-201ENST00000075430 CXorf21Q9HAI6 301 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 CRYL1Q9Y2S2 319 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 LRRC14BA6NHZ5 514 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 NCF1BA6NI72 391 aaPredicted RBP16.92■□□□□ 0.3
CTDP1-201ENST00000075430 NCF1CA8MVU1 366 aaPredicted RBP16.92■□□□□ 0.3
CTDP1-201ENST00000075430 CLOCKO15516 846 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 HTRA2O43464 458 aaPredicted RBP16.92■□□□□ 0.3
CTDP1-201ENST00000075430 BAIAP3O94812 1187 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 NCF1P14598 390 aaPredicted RBP16.92■□□□□ 0.3
CTDP1-201ENST00000075430 BFSP2Q13515 415 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 DPYSL2Q16555 572 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 ZNF789Q5FWF6 425 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 RBM20Q5T481 1227 aaKnown RBP16.92■□□□□ 0.3
CTDP1-201ENST00000075430 ARHGAP36Q6ZRI8 547 aa16.92■□□□□ 0.3
CTDP1-201ENST00000075430 PSTKQ8IV42 348 aaKnown RBP16.92■□□□□ 0.3
CTDP1-201ENST00000075430 TXNDC5Q8NBS9 432 aaKnown RBP16.92■□□□□ 0.3
CTDP1-201ENST00000075430 COL2A1P02458 1487 aaPredicted RBP16.91■□□□□ 0.3
CTDP1-201ENST00000075430 SRP72O76094 671 aaKnown RBP16.91■□□□□ 0.3
CTDP1-201ENST00000075430 IL18RAPO95256 599 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 STMN1P16949 149 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 REP15Q6BDI9 236 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 FIBCD1Q8N539 461 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 OR52K2Q8NGK3 314 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 HEXDCQ8WVB3 486 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 DGCR6LQ9BY27 220 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 PDZD7Q9H5P4 517 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 PIGVQ9NUD9 493 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 TBC1D30Q9Y2I9 924 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 MDM4O15151 490 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 ZNF23P17027 643 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 ADCYAP1R1P41586 468 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 C21orf59P57076 290 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 MAPK11Q15759 364 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 SAPCD2Q86UD0 394 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 SLC35F5Q8WV83 523 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 FICDQ9BVA6 458 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 TBC1D23Q9NUY8 699 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 OLAHQ9NV23 265 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 MKS1Q9NXB0 559 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 OAZ3Q9UMX2 235 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 NOL3O60936 208 aaKnown RBP16.91■□□□□ 0.3
CTDP1-201ENST00000075430 PRKCQQ04759 706 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 SPANXN3Q5MJ09 141 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 CELF3Q5SZQ8 465 aaKnown RBP16.91■□□□□ 0.3
CTDP1-201ENST00000075430 CXorf38Q8TB03 319 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 ESAMQ96AP7 390 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 ISOC1Q96CN7 298 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 EIF2AQ9BY44 585 aaKnown RBP16.91■□□□□ 0.3
CTDP1-201ENST00000075430 DRC3Q9H069 523 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 ALG9Q9H6U8 611 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 CLK4Q9HAZ1 481 aaKnown RBP16.91■□□□□ 0.3
CTDP1-201ENST00000075430 CROTQ9UKG9 612 aa16.91■□□□□ 0.3
CTDP1-201ENST00000075430 ZCWPW2A0A1B0GU75 182 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 UGT1A1P22309 533 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 UGT1A4P22310 534 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 ALDH4A1P30038 563 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 UGT1A3P35503 534 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 UGT1A5P35504 534 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 STX1BP61266 288 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 RIOX2Q8IUF8 465 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 LSMEM2Q8N112 164 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 PBXIP1Q96AQ6 731 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 RTP4Q96DX8 246 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 ZNF696Q9H7X3 374 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 EXD2Q9NVH0 621 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 SMOXQ9NWM0 555 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 CPA4Q9UI42 421 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 ZNF510Q9Y2H8 683 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 PRSS51A0A1B0GVH4 220 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 TIMM44O43615 452 aa16.9■□□□□ 0.3
CTDP1-201ENST00000075430 CCDC166P0CW27 439 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms