RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 SPG21Q9NZD8 308 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 XPR1Q9UBH6 696 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 A0A1W2PRU2 124 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 TK2O00142 265 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 HNRNPCL1O60812 293 aaKnown RBP12.2□□□□□ -0.46
CHPF2-201ENST00000035307 PFDN1O60925 122 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 EN2P19622 333 aaPredicted RBP12.2□□□□□ -0.46
CHPF2-201ENST00000035307 MPSTP25325 297 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 NFKBIAP25963 317 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 GLUD2P49448 558 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 INCA1Q0VD86 236 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 PTK2BQ14289 1009 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 AGAP9Q5VTM2 703 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 TRNP1Q6NT89 227 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 ARHGAP36Q6ZRI8 547 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 ZNF366Q8N895 744 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 SLC22A17Q8WUG5 538 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 TEKT4Q8WW24 435 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 BADQ92934 168 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 POMKQ9H5K3 350 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 DTNAQ9Y4J8 743 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 CLUHO75153 1309 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 CASP8AP2Q9UKL3 1982 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 GRXCR1A8MXD5 290 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 TUFMP49411 452 aaKnown RBP12.19□□□□□ -0.46
CHPF2-201ENST00000035307 OXCT1P55809 520 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 CLDN10P78369 228 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 MPP1Q00013 466 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 PPM1LQ5SGD2 360 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 THEMIS2Q5TEJ8 643 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 RNF43Q68DV7 783 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 C4orf22Q6V702 233 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 LRRC74BQ6ZQY2 392 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 ARFGAP1Q8N6T3 406 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 GRIN3AQ8TCU5 1115 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 SYT11Q9BT88 431 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 DENND2DQ9H6A0 471 aaPredicted RBP12.19□□□□□ -0.46
CHPF2-201ENST00000035307 RGS18Q9NS28 235 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 NCKIPSDQ9NZQ3 722 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 PNMA8BQ9ULN7 279 aaPredicted RBP12.19□□□□□ -0.46
CHPF2-201ENST00000035307 RNF112Q9ULX5 631 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 SPTBN2O15020 2390 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 L1CAMP32004 1257 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 ESRRGP62508 458 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 COL9A2Q14055 689 aaPredicted RBP12.19□□□□□ -0.46
CHPF2-201ENST00000035307 GALNT3Q14435 633 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 MBTPS1Q14703 1052 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 RIPOR1Q6ZS17 1223 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 ZBTB46Q86UZ6 589 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 MON1AQ86VX9 555 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 C12orf76Q8N812 135 aaPredicted RBP12.19□□□□□ -0.46
CHPF2-201ENST00000035307 CNDP1Q96KN2 507 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 HBEGFQ99075 208 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 TCF25Q9BQ70 676 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 TBL1YQ9BQ87 522 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 C11orf49Q9H6J7 331 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 EML4Q9HC35 981 aaKnown RBP12.19□□□□□ -0.46
CHPF2-201ENST00000035307 TMEM216Q9P0N5 145 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.19□□□□□ -0.46
CHPF2-201ENST00000035307 PCDHA11Q9Y5I1 949 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 SAC3D1A6NKF1 404 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 DAB1O75553 588 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 PRKCGP05129 697 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 GRK2P25098 689 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 FMO4P31512 558 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 GRIA4P48058 902 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 SLC25A11Q02978 314 aaKnown RBP12.19□□□□□ -0.46
CHPF2-201ENST00000035307 PTP4A2Q12974 167 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 BNIP1Q12981 228 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 XRCC4Q13426 336 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 SIX1Q15475 284 aaPredicted RBP12.19□□□□□ -0.46
CHPF2-201ENST00000035307 OASLQ15646 514 aaKnown RBP12.19□□□□□ -0.46
CHPF2-201ENST00000035307 NRF1Q16656 503 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 SWT1Q5T5J6 900 aaKnown RBP12.19□□□□□ -0.46
CHPF2-201ENST00000035307 BNC2Q6ZN30 1099 aaPredicted RBP12.19□□□□□ -0.46
CHPF2-201ENST00000035307 DENND6AQ8IWF6 608 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 RBM15BQ8NDT2 890 aaKnown RBP12.19□□□□□ -0.46
CHPF2-201ENST00000035307 ZBTB18Q99592 522 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 COPS7BQ9H9Q2 264 aaPredicted RBP12.19□□□□□ -0.46
CHPF2-201ENST00000035307 ACTL7BQ9Y614 415 aa12.19□□□□□ -0.46
CHPF2-201ENST00000035307 ATG2BQ96BY7 2078 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 SCN1AP35498 2009 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 B4GALT3O60512 393 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 TBL1XO60907 577 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 CNTN5O94779 1100 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 EOMESO95936 686 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 CYBBP04839 570 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 PFKMP08237 780 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 POU4F1Q01851 419 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 PFKFB4Q16877 469 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 ARHGAP17Q68EM7 881 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 SLC39A5Q6ZMH5 540 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 PIGWQ7Z7B1 504 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 RNF217Q8TC41 542 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 NMD3Q96D46 503 aaKnown RBP12.18□□□□□ -0.46
CHPF2-201ENST00000035307 TSPAN17Q96FV3 270 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 SEMA3CQ99985 751 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 TRIM62Q9BVG3 475 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 ARFGEF1Q9Y6D6 1849 aa12.18□□□□□ -0.46
CHPF2-201ENST00000035307 NEMP2A6NFY4 417 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms