RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 DNAJC1Q96KC8 554 aaKnown RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 EBNA1BP2Q99848 306 aaKnown RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 FAM118BQ9BPY3 351 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 TBCDQ9BTW9 1192 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 SLC27A6Q9Y2P4 619 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 GIT1Q9Y2X7 761 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 CAMTA2O94983 1202 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 SNRPB2P08579 225 aaKnown RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 CYP11B2P19099 503 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 HTR1BP28222 390 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 S100A3P33764 101 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 HSD17B2P37059 387 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 ARPP19P56211 112 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 PPP4CP60510 307 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 PLCL1Q15111 1095 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 TRAM1Q15629 374 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 PDK4Q16654 411 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 LIPMQ5VYY2 423 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 SHC4Q6S5L8 630 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 DHDDSQ86SQ9 333 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 UTP15Q8TED0 518 aaKnown RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 GDPD5Q8WTR4 605 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 ZNF75CPQ92670 426 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 YTHDF1Q9BYJ9 559 aaKnown RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 IRX2Q9BZI1 471 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 LMAN2LQ9H0V9 348 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 CST11Q9H112 138 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 LRMDAQ9H2I8 198 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 PCDHGA3Q9Y5H0 932 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 ADGRB2O60241 1585 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 PTPRZ1P23471 2315 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 TOP3BO95985 862 aaKnown RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 PDHBP11177 359 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 LBPP18428 481 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 PON1P27169 355 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 AVPR1AP37288 418 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 ABRQ12979 859 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 INAVAQ3KP66 663 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 CHST15Q7LFX5 561 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 MTDHQ86UE4 582 aaKnown RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 TTLQ8NG68 377 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 RASGRP4Q8TDF6 673 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 UBASH3BQ8TF42 649 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 RERGQ96A58 199 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 ZNF347Q96SE7 839 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 TMEM120AQ9BXJ8 343 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 CDC42EP4Q9H3Q1 356 aaKnown RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 JMJD4Q9H9V9 463 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 MARCOQ9UEW3 520 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 ACSL4O60488 711 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 ENDOUP21128 410 aaKnown RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 RTP1P59025 263 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 RGS1Q08116 209 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 CDC16Q13042 620 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 LRRC14Q15048 493 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 NDUFA9Q16795 377 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 UNC5CLQ8IV45 518 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 FBXO32Q969P5 355 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 CREB3L1Q96BA8 519 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 CGRRF1Q99675 332 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 RTKNQ9BST9 563 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 SPON1Q9HCB6 807 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 MARK1Q9P0L2 795 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 ADGRB1O14514 1584 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 PDCD5O14737 125 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 NTRK1P04629 796 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 CHKAP35790 457 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 MNDAP41218 407 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 CENPAP49450 140 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 PSME3P61289 254 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 SNRPD1P62314 119 aaKnown RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 FKBP1AP62942 108 aaKnown RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 PRR5P85299 388 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 SETMARQ53H47 684 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 USP17L6PQ6QN14 398 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 SPATA19Q7Z5L4 167 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 GPSM1Q86YR5 675 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 TAB3Q8N5C8 712 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 ZNF513Q8N8E2 541 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 HTR3CQ8WXA8 447 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 BHMTQ93088 406 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 PSKH2Q96QS6 385 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 RHBDL2Q9NX52 303 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 KCNE2Q9Y6J6 123 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 ZNF879B4DU55 563 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 KHDRBS3O75525 346 aaKnown RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 C6orf222P0C671 652 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 PRKAR2AP13861 404 aaKnown RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 PSMB9P28065 219 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 INHBEP58166 350 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 C4orf33Q8N1A6 199 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 FBXO36Q8NEA4 188 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 MAGEE2Q8TD90 523 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 KCNV2Q8TDN2 545 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 MPP4Q96JB8 637 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 EHD3Q9NZN3 535 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 AP4E1Q9UPM8 1137 aa6.13□□□□□ -1.43
VPS13D-201ENST00000011700 RUVBL1Q9Y265 456 aaKnown RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 MAGED1Q9Y5V3 778 aaPredicted RBP6.13□□□□□ -1.43
VPS13D-201ENST00000011700 RIC1Q4ADV7 1423 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms