RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 GaaP70699 953 aa11.9□□□□□ -0.51
Scn8a-208ENSMUST00000200963 PrkcqQ02111 707 aa11.9□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Stt3bQ3TDQ1 823 aa11.9□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Rap1gap2Q5SVL6 712 aaKnown RBP11.9□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Tshz2Q68FE9 1030 aa11.9□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Znf821Q6PD05 413 aa11.9□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Bend6Q6PFX2 281 aa11.9□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Klhl26Q8BGY4 606 aa11.9□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Mapkap1Q8BKH7 522 aa11.9□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Mgat5Q8R4G6 740 aa11.9□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Fbxo21Q8VDH1 627 aa11.9□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Oser1Q9D722 291 aa11.9□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Dus2Q9D7B1 493 aa11.9□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Hecw2Q6I6G8 1578 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Ptch2O35595 1182 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Hipk1O88904 1210 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Tcf3P15806 651 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Htr5bP31387 370 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Ube2e3P52483 207 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Cntn3Q07409 1028 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Mapkapk3Q3UMW7 384 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Zdhhc15Q8BGJ0 337 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Mamdc2Q8CG85 686 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Iigp1Q9QZ85 413 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Arid3bQ9Z1N7 568 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Gria4Q9Z2W8 902 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Mtx3D3YTP3 312 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Slc1a6O35544 561 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Snrpd1P62315 119 aaKnown RBP11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Gstt2Q61133 244 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Eif2b4Q61749 524 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Tas2r104Q7M723 302 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Phf8Q80TJ7 1023 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Fbxl4Q8BH70 621 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Mterf2Q8BKY8 385 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Camk1dQ8BW96 385 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Lrp8Q924X6 996 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Tma16Q9CR02 221 aaKnown RBP11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Mtif3Q9CZD5 276 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 MtpapQ9D0D3 585 aaKnown RBP11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Btnl4A2CG29 586 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Gm8180E9PXN0 145 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Gm6337K7N6X9 211 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Gm3115L7N285 211 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Scamp3O35609 349 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Usp46P62069 366 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Cyp4f37Q3V1F1 546 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Fnip1Q68FD7 1165 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Cyp2c54Q6XVG2 490 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Pcdh20Q8BIZ0 952 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Bdh2Q8JZV9 245 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 St7lQ8K4P7 559 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Ace2Q8R0I0 805 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Klhl36Q8R124 613 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Sirt2Q8VDQ8 389 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Pdcd10Q8VE70 212 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Snx15Q91WE1 337 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Snrpb2Q9CQI7 225 aaKnown RBP11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Rec114Q9CWH4 259 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Snrnp48Q9D361 337 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Rpl38Q9JJI8 70 aaKnown RBP11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Smpd3Q9JJY3 655 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Setd1aE9PYH6 1716 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Gm2888K7N746 267 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Hcn4O70507 1186 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Epb41P48193 858 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Lsm3P62311 102 aaKnown RBP11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Kcnq1P97414 668 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Col6a2Q02788 1034 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Sf1Q64213 653 aaKnown RBP11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Pfkfb4Q6DTY7 469 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Zc3h11aQ6NZF1 792 aaKnown RBP11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Vps4aQ8VEJ9 437 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Pacsin3Q99JB8 424 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Me2Q99KE1 589 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Akr1c12Q9JLI0 323 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Tcea2Q9QVN7 299 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Ulk2Q9QY01 1037 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Elf4Q9Z2U4 655 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Hist2h2abQ64522 130 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Klhl6Q6V595 619 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Plppr4Q7TME0 766 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Pwp2Q8BU03 919 aaKnown RBP11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 C1qtnf7Q8BVD7 289 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Kat5Q8CHK4 513 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Gpr1Q8K087 353 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Tnfaip8l1Q8K288 186 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 PiguQ8K358 434 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 TgdsQ8VDR7 355 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 ToporslQ9D2F8 683 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Olfr2Q9QWU6 327 aa11.89□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Disp2Q8CIP5 1345 aa11.88□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Glipr1l3A0A1W2P7V2 236 aa11.88□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Fam46dB1ATX6 390 aa11.88□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Vmn2r46L7N282 809 aa11.88□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Dgcr6O35347 198 aa11.88□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Clk3O35492 638 aa11.88□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Idh2P54071 452 aaKnown RBP11.88□□□□□ -0.51
Scn8a-208ENSMUST00000200963 Btbd3P58545 530 aa11.88□□□□□ -0.51
Scn8a-208ENSMUST00000200963 H2-M3Q31093 336 aa11.88□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms