RNA–Protein interactions for RNA: ENSMUST00000117548.1

Hmgb1-ps2-201, mousemouse

BASIC

Gene Hmgb1-ps2, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-ps2-201ENSMUST00000117548 Htra4A2RT60 483 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Skint6A7XUZ6 1240 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Pcsk6F6XJP7 959 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Vmn1r60G3UY47 300 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Lmx1bO88609 395 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Esx1O88933 382 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Il2rbP16297 539 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Slc1a5P51912 553 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Dbx1P52950 335 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Kpnb1P70168 876 aaKnown RBP4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Atp8a2P98200 1148 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Trim71Q1PSW8 855 aaKnown RBP4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Zfp386Q1WWJ5 626 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Nxpe2Q3U095 558 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Q3UST5 385 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Ube2fbQ3UWQ3 185 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Prss53Q571E5 552 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Sco1Q5SUC9 284 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 CtcfQ61164 736 aaKnown RBP4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Sh3gl2Q62420 352 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Apex2Q68G58 516 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Atg16l2Q6KAU8 623 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Zik1Q80YP6 463 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 1700001K19RikQ80ZT1 219 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Btnl9Q8BJE2 536 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Morc4Q8BMD7 928 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Klhl24Q8BRG6 600 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Ankrd33Q8BXP5 385 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 TpbglQ8C013 384 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Sh3rf3Q8C120 878 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Emc1Q8C7X2 997 aaKnown RBP4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Kbtbd13Q8C828 458 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Galnt18Q8K1B9 622 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Lsm14aQ8K2F8 462 aaKnown RBP4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Ddx18Q8K363 660 aaKnown RBP4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Impg1Q8R1W8 798 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Unc45aQ99KD5 944 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Mov10l1Q99MV5 1187 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Sec23bQ9D662 767 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Usp12Q9D9M2 370 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Spata3Q9D9T6 193 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Smim23Q9DAL0 136 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 P2ry14Q9ESG6 338 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Trpc4apQ9JLV2 797 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Wnt16Q9QYS1 364 aa4.33□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Rimbp3Q3V0F0 1606 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Abcc10Q8R4P9 1501 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Iqsec2Q5DU25 1478 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Tns3Q5SSZ5 1440 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Usp19Q3UJD6 1360 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 CemipQ8BI06 1361 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 PaskQ8CEE6 1383 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Zmym2Q9CU65 1376 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Rnf123Q5XPI3 1314 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Sik3Q6P4S6 1311 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Ighv1-34A0A075B5V2 117 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Akap17bA2A3V1 959 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Tatdn2B7ZNL9 783 aaKnown RBP4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Gm5286E0CXI6 357 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Gm3594E9Q2A7 267 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Zfp867E9Q2M4 473 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 KlO35082 1014 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Smarce1O54941 411 aaKnown RBP4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Tcstv3O70518 169 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Mtnd2P03893 345 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Tuba3aP05214 450 aaKnown RBP4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 CtslP06797 334 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 MpoP11247 718 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Nudt19P11930 357 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Ca8P28651 291 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Rab21P35282 222 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Morf4l1P60762 362 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 FerP70451 823 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Prmt9Q3U3W5 846 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Gm14851Q5ERJ0 116 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Vps54Q5SPW0 977 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Drd1Q61616 446 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Itih3Q61704 889 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 SordQ64442 357 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Cyp4b1Q64462 511 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Fam167aQ6P1G6 215 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 S100a15aQ6S5I3 108 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Ccnt2Q7TQK0 723 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Usp8Q80U87 1080 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Best2Q8BGM5 508 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Tmtc3Q8BRH0 920 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Vps37aQ8CHS8 397 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Grk5Q8VEB1 590 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Olfr659Q8VGV6 322 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Olfr1390Q8VGW9 311 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Ca9Q8VHB5 437 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Eps8l2Q99K30 729 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Cstf3Q99LI7 717 aaKnown RBP4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Rnps1Q99M28 305 aaKnown RBP4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Cep41Q99NF3 373 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Tsnaxip1Q99P25 704 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Rnf115Q9D0C1 305 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Dnajb4Q9D832 337 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 Inpp4aQ9EPW0 939 aa4.32□□□□□ -1.72
Hmgb1-ps2-201ENSMUST00000117548 C1qtnf3Q9ES30 246 aa4.32□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms