RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 LipmQ8K2A6 422 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 MfrpQ8K480 584 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 HnrnprQ8VHM5 632 aaKnown RBP11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 GcshQ91WK5 170 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ccdc97Q9DBT3 340 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Zw10O54692 779 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Il1rnP25085 178 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Btg3P50615 252 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Pitpnm3Q3UHE1 974 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Srbd1Q497V5 1015 aaKnown RBP11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Capn11Q6J756 714 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Inpp4bQ6P1Y8 924 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Zfp57Q8C6P8 421 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Fbxo33Q8VE08 562 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Olfr695Q8VFM3 315 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Npm3Q9CPP0 175 aaKnown RBP11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Mrps33Q9D2R8 106 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 5530400C23RikQ9D3I0 173 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Cdyl2Q9D5D8 503 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Mrps9Q9D7N3 390 aaKnown RBP11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Klc1O88447 541 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Pias1O88907 651 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Wnt6P22727 364 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 KhsrpQ3U0V1 748 aaKnown RBP11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Nlrc4Q3UP24 1024 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Tmem45aQ60774 273 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ccdc63Q8CDV6 558 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Cnot3Q8K0V4 751 aaKnown RBP11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Mrgpra2Q91WW4 305 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Dpy30Q99LT0 99 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Pramel1Q99MW3 458 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 PollQ9QXE2 573 aaKnown RBP11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Fut8Q9WTS2 575 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Scamp3O35609 349 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Tas2r16P59529 299 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Rab10P61027 200 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Akap14Q3V0I7 536 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ca4Q64444 305 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 RragdQ7TT45 449 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Slc20a2Q80UP8 656 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ostm1Q8BGT0 338 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gm6377Q8BHV4 303 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Znf784Q8BI69 297 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Slc25a11Q9CR62 314 aaKnown RBP11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Adgrf4Q9D2L6 698 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Kctd4Q9D7X1 259 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Syde1Q9DBZ9 737 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 AuhQ9JLZ3 314 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Mzf1S4R1L6 814 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Lrp5Q91VN0 1614 aa11.99□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gm10720D3Z1I5 223 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Vmn2r73D3Z7M3 851 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 C2cd2E9Q3C1 696 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Vmn2r111K7N674 857 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Mcpt4P21812 246 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 CamkmtQ3U2J5 323 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ctc1Q5SUQ9 1212 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Otub1Q7TQI3 271 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Nrde2Q80XC6 1172 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Clec4gQ8BNX1 294 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Lrrc4cQ8C031 640 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Snx30Q8CE50 437 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Olfr342Q8VGK7 312 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Fam166bA2AIP0 273 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gm13101A2ASJ0 481 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 HpcaP84075 193 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gm29609Q3UU56 907 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Fbxo30Q8BJL1 746 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gtf3c2Q8BL74 907 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Fnbp1lQ8K012 605 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Barhl2Q8VIB5 384 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Zfp617Q91WM0 559 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Pcdhb13Q91Y06 796 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gtf2ird2Q99NI3 936 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Coro7Q9D2V7 922 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 PirQ9D711 290 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ift46Q9DB07 301 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Rnf19bA2A7Q9 732 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gm13119B1ARV5 481 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Serpina3jD3Z451 420 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Adgrf2E9Q4J9 644 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Srsf11E9Q6E5 511 aaKnown RBP11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Grip2G3XA20 1042 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Aqp1Q02013 269 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ttyh3Q6P5F7 524 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Prdm8Q8BZ97 687 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Q8C5S3 137 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Ppp1r14cQ8R4S0 164 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Olfr693Q8VF89 316 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Atg13Q91YI1 516 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Fbxo17Q9QZM8 286 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Il18rapQ9Z2B1 614 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Col2a1P28481 1487 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Zbed6D2EAC2 980 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Wnt3aP27467 352 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 VegfbP49766 207 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Pecam1Q08481 727 aaKnown RBP11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Foxr1Q3UTB7 268 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Gm11487Q5RIS0 354 aa11.98□□□□□ -0.49
Pcif1-201ENSMUST00000041643 Tas2r129Q7M709 320 aa11.98□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms