RNA–Protein interactions for RNA: ENSMUST00000022330.8

Ldb3-203, Transcript of LIM domain-binding protein 3, mousemouse

TSL 1 (best) BASIC

Gene Ldb3, Length 1,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-203ENSMUST00000022330 P01673 111 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Myl4P09541 193 aaKnown RBP12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 VdrP48281 422 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Tead2P48301 445 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Ranbp9P69566 653 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Slc22a16Q497L8 649 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Prss53Q571E5 552 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Arhgap44Q5SSM3 814 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Gdpd5Q640M6 607 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Ripor1Q68FE6 1223 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Fam120bQ6RI63 786 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Zbtb41Q811F1 908 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Cpsf7Q8BTV2 471 aaKnown RBP12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Itpk1Q8BYN3 419 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Tgif2Q8C0Y1 237 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Thop1Q8C1A5 687 aaKnown RBP12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Fem1cQ8CEF1 617 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Pacs1Q8K212 961 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 MfrpQ8K480 584 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 GrpQ8R1I2 146 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Trpm8Q8R4D5 1104 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Sh3kbp1Q8R550 709 aaKnown RBP12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Mark1Q8VHJ5 795 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Pcdhb18Q91Y02 792 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Pde6cQ91ZQ1 861 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Ephx1Q9D379 455 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Agpat3Q9D517 376 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Kbtbd12Q9D618 625 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Ppil6Q9D6D8 278 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Ten1Q9D7K2 161 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Msh5Q9QUM7 833 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 NagaQ9QWR8 415 aa12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 PygmQ9WUB3 842 aaKnown RBP12.38□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Igkv5-39A0A0G2JDV4 115 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Cep85lA0A1W2P884 806 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Gm12248A0A1W2P8B8 313 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Fibcd1A2AV25 459 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Tcp10cE9Q046 482 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Gm8257E9Q8R3 264 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Vmn2r10K7N621 847 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Spp1P10923 294 aaKnown RBP12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 SmoP56726 793 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Arf5P84084 180 aaKnown RBP12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Rab33aP97950 237 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Eml1Q05BC3 814 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Cd300lgQ1ERP8 331 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Ripply1Q2WG77 201 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Dennd1bQ3U1T9 766 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Ccdc110Q3V125 848 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 HecaQ3V1N5 544 aaKnown RBP12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Phactr4Q501J7 694 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Lrrc8bQ5DU41 803 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Spata48Q5NC83 441 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Spata24Q6P926 205 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Efr3bQ6ZQ18 817 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Rbm12b1Q80YR9 836 aaKnown RBP12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 H2-M10.2Q85ZW9 329 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 BfarQ8R079 450 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Gfm2Q8R2Q4 779 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Lrrc14Q8VC16 493 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 GzmnQ920S1 248 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Tcf7l2Q924A0 459 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 XpotQ9CRT8 963 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Q9D1F3 157 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Tmem80Q9D3H0 123 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Cyp2c55Q9D816 490 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Olfr703Q9EPF5 319 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Pi16Q9ET66 489 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Pard6bQ9JK83 371 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Tmem115Q9WUH1 350 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Aldh18a1Q9Z110 795 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Vmn2r25W4VSP2 855 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Dnah12Q3V0Q1 3086 aa12.37□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Vmn2r104E9Q2J5 860 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Rap1gds1E9Q912 607 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Nsmce4aG3XA30 381 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Znf683I7HJS4 458 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Bmpr2O35607 1038 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 TyrP11344 533 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 UmpsP13439 481 aaKnown RBP12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Prdx3P20108 257 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Cd9P40240 226 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 CskP41241 450 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Dbx1P52950 335 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 ErgP81270 486 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Caprin2Q05A80 1031 aaKnown RBP12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Fam131bQ3TY60 332 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Arglu1Q3UL36 271 aaKnown RBP12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Serpinb6Q60854 378 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Abcd2Q61285 741 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 ItpkcQ7TS72 678 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Trit1Q80UN9 467 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Wbp1lQ8BGW2 348 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Exoc3l1Q8BI71 739 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Spp2Q8K1I3 203 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Hacd3Q8K2C9 362 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Osbpl1aQ91XL9 950 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Dnajc3Q91YW3 504 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Ppp1r16aQ923M0 524 aa12.36□□□□□ -0.43
Ldb3-203ENSMUST00000022330 Grk2Q99MK8 689 aa12.36□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms