RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Ripk3Q9QZL0 486 aa11.65□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Myh9Q8VDD5 1960 aaKnown RBP11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 F830016B08RikG3UWE2 416 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Cyp27b1O35084 507 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Hspa4lP48722 838 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Fam83hQ148V8 1209 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Gm13103Q4VAD2 491 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Pabpc2Q62029 628 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Zfp398Q8BV16 643 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 MaobQ8BW75 520 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Nuak2Q8BZN4 639 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Sfrp1Q8C4U3 314 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Mob2Q8VI63 235 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Me2Q99KE1 589 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Pard3bQ9CSB4 1203 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Slc5a3Q9JKZ2 718 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Myo16Q5DU14 1919 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Smim17A0A504 109 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Kbtbd6E9PYD7 486 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Kbtbd7G5E8C2 690 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 E230025N22RikG5E8S3 482 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Lta4hP24527 611 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Fabp7P51880 132 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Dnal1Q05A62 190 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Fam47cQ14BE7 430 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Mif4gdQ3UBZ5 222 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Rmdn3Q3UJU9 470 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Rbm44Q3V089 1013 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Chi3l1Q61362 389 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Ifngr2Q63953 332 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Carns1Q6ZPS2 827 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 4930503B20RikQ80ZP0 234 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Znf410Q8BKX7 478 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Elmo1Q8BPU7 727 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 D630039A03RikQ8K0M7 236 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Dlk2Q8K1E3 382 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 UvragQ8K245 698 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Stk32cQ8QZV4 488 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Dpp3Q99KK7 738 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Oma1Q9D8H7 521 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Tbc1d21Q9D9D3 336 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Ptk2bQ9QVP9 1009 aa11.64□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Man1b1A2AJ15 658 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Ppp1r36D3Z0R2 411 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Gm21915J3QPM7 133 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Per1O35973 1291 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 InvsO89019 1062 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Ifnb1P01575 182 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Krt10P02535 570 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Icam1P13597 537 aaKnown RBP11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Znf112Q0VAW7 879 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Pdlim7Q3TJD7 457 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Lrrc14bQ3UJB3 510 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Trappc3lQ4KL14 181 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Gm11992Q5SS90 291 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Pik3r5Q5SW28 871 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Tfap2bQ61313 459 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 MslnQ61468 625 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Adgre1Q61549 931 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 MogQ61885 246 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Tmem259Q8CIV2 574 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Ttc36Q8VBW8 186 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Ndufs2Q91WD5 463 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 MrrfQ9D6S7 262 aaKnown RBP11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Rnf225Q9D7D1 332 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Il21rQ9JHX3 529 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Slfn2Q9Z0I6 378 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Tspoap1Q7TNF8 1846 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Gm3147A0A0J9YU88 481 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Prdm12A2AJ77 365 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Pnldc1B2RXZ1 531 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Lilra5D3Z7A9 295 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Zfp558E9Q1J0 407 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Gm5160F8VPN3 147 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Slc1a6O35544 561 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Nr4a1P12813 601 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Atp6v0d1P51863 351 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Uchl4P58321 233 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Znf219Q6IQX8 726 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Q6P2K3 674 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 1700001J03RikQ80ZR8 219 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Tgm4Q8BZH1 670 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 4932411N23RikQ8C0S0 470 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Klhl36Q8R124 613 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Scrn2Q8VCA8 425 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Ubxn2aQ99KJ0 258 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Tlr3Q99MB1 905 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Scyl1Q9EQC5 806 aaKnown RBP11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Enpp2Q9R1E6 862 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Cacna1fQ9JIS7 1985 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Dthd1E9PZX1 795 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Rad51ap2G3UW63 976 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Tnk2O54967 1055 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Ppargc1aO70343 797 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 NsfP46460 744 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Mfsd14aP70187 490 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 FaddQ61160 205 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 BC080695Q66JY9 481 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Acot5Q6Q2Z6 421 aa11.63□□□□□ -0.55
Sdc1-201ENSMUST00000020911 Dnajc22Q8CHS2 339 aa11.63□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms