RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 PSKH2Q96QS6 385 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 TNKS2Q9H2K2 1166 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 ZDHHC6Q9H6R6 413 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 C10orf88Q9H8K7 445 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 LMAN1LQ9HAT1 526 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 PDFQ9HBH1 243 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 POLMQ9NP87 494 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-218ENST00000641491 BCCIPQ9P287 314 aaKnown RBP eCLIP13.15□□□□□ -0.3
PHGDH-218ENST00000641491 HECAQ9UBI9 543 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-218ENST00000641491 PCYOX1Q9UHG3 505 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 STARD13Q9Y3M8 1113 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 STON1Q9Y6Q2 735 aa13.15□□□□□ -0.3
PHGDH-218ENST00000641491 ZFHX2Q9C0A1 2572 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-218ENST00000641491 TRIOO75962 3097 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 TARSL2A2RTX5 802 aaKnown RBP13.14□□□□□ -0.31
PHGDH-218ENST00000641491 TTC34A8MYJ7 566 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 PDE2AO00408 941 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-218ENST00000641491 ATP9BO43861 1147 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 GFRA3O60609 400 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 GCATO75600 419 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 ZMPSTE24O75844 475 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 POP4O95707 220 aaKnown RBP13.14□□□□□ -0.31
PHGDH-218ENST00000641491 PRNPP04156 253 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 HLA-DQB2P05538 268 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 ACADMP11310 421 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 HNRNPLP14866 589 aaKnown RBP eCLIP13.14□□□□□ -0.31
PHGDH-218ENST00000641491 WASP42768 502 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 VASPP50552 380 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-218ENST00000641491 ZBTB17Q13105 803 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 HNRNPA1L2Q32P51 320 aaKnown RBP13.14□□□□□ -0.31
PHGDH-218ENST00000641491 GLE1Q53GS7 698 aaKnown RBP13.14□□□□□ -0.31
PHGDH-218ENST00000641491 PPP1R21Q6ZMI0 780 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 TRIM67Q6ZTA4 783 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 Q6ZVU0 165 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 JAMLQ86YT9 394 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 ZNF567Q8N184 647 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 PGBD3Q8N328 593 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 PHTF2Q8N3S3 785 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 TXNDC5Q8NBS9 432 aaKnown RBP13.14□□□□□ -0.31
PHGDH-218ENST00000641491 GANCQ8TET4 914 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 PDCD6IPQ8WUM4 868 aaKnown RBP13.14□□□□□ -0.31
PHGDH-218ENST00000641491 PBXIP1Q96AQ6 731 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 TEKT5Q96M29 485 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 SEMA3CQ99985 751 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 IER2Q9BTL4 223 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 OSBPL1AQ9BXW6 950 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 GBA3Q9H227 469 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 GLOD4Q9HC38 313 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 RAB6BQ9NRW1 208 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 IL36AQ9UHA7 158 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 SIT1Q9Y3P8 196 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 SPTBN4Q9H254 2564 aa13.14□□□□□ -0.31
PHGDH-218ENST00000641491 RIF1Q5UIP0 2472 aaKnown RBP13.13□□□□□ -0.31
PHGDH-218ENST00000641491 A0A1W2PQ67 120 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 KRBA1A5PL33 1030 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 TMEM221A6NGB7 291 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 EFCAB8A8MWE9 144 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 F5H423 210 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-218ENST00000641491 K7EQS6 105 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 K7ERQ8 282 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 M0R296 226 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 INSIG1O15503 277 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 MT-CO1P00395 513 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 HLA-EP13747 358 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 NFKB1P19838 968 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 CD86P42081 329 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 IL12RB1P42701 662 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 TERF1P54274 439 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 MAXP61244 160 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 NSUN2Q08J23 767 aaKnown RBP eCLIP13.13□□□□□ -0.31
PHGDH-218ENST00000641491 PTK6Q13882 451 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 ELAVL3Q14576 367 aaKnown RBP13.13□□□□□ -0.31
PHGDH-218ENST00000641491 PARP6Q2NL67 630 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 TTC31Q49AM3 519 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-218ENST00000641491 ATXN7L2Q5T6C5 722 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-218ENST00000641491 TMEM215Q68D42 235 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 SRLQ86TD4 932 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 TAB3Q8N5C8 712 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-218ENST00000641491 TEX26Q8N6G2 289 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 TSEN2Q8NCE0 465 aaKnown RBP13.13□□□□□ -0.31
PHGDH-218ENST00000641491 PJA1Q8NG27 643 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 GRIN3AQ8TCU5 1115 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 UBXN4Q92575 508 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 NUDCD1Q96RS6 583 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 TUBGCP5Q96RT8 1024 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 IL12RB2Q99665 862 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 MGME1Q9BQP7 344 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 HEPHQ9BQS7 1158 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 ADGRE3Q9BY15 652 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 OSBPL6Q9BZF3 934 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 TRIM31Q9BZY9 425 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 FOXQ1Q9C009 403 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 IRF2BPLQ9H1B7 796 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 SLC25A51Q9H1U9 297 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 L2HGDHQ9H9P8 463 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 VPS45Q9NRW7 570 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 FAM153AQ9UHL3 310 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 SLCO3A1Q9UIG8 710 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 TICRRQ7Z2Z1 1910 aa13.13□□□□□ -0.31
PHGDH-218ENST00000641491 KIF26AQ9ULI4 1882 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms