RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 TTC7AQ9ULT0 858 aaPredicted RBP8.19□□□□□ -1.1
SCARB2-220ENST00000640076 HBS1LQ9Y450 684 aaKnown RBP8.19□□□□□ -1.1
SCARB2-220ENST00000640076 TRAF6Q9Y4K3 522 aa8.19□□□□□ -1.1
SCARB2-220ENST00000640076 PCDHA9Q9Y5H5 950 aa8.19□□□□□ -1.1
SCARB2-220ENST00000640076 EYSQ5T1H1 3165 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 SLC12A8A0AV02 714 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 VGLL3A8MV65 326 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 KCNU1A8MYU2 1149 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 PGRMC1O00264 195 aaKnown RBP8.18□□□□□ -1.1
SCARB2-220ENST00000640076 LINC01565O15544 149 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 COQ9O75208 318 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 MOSPD3O75425 235 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 FGGP02679 453 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 GJA1P17302 382 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 NFKB1P19838 968 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 CDKN2BP42772 138 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 KPNA1P52294 538 aaPredicted RBP8.18□□□□□ -1.1
SCARB2-220ENST00000640076 CDH6P55285 790 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 NTHL1P78549 312 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 DPYSL3Q14195 570 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 ADGRE1Q14246 886 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 PDK2Q15119 407 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 SLC5A9Q2M3M2 681 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 ARL13BQ3SXY8 428 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 HSP90B2PQ58FF3 399 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 ODF2Q5BJF6 829 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 EFHC2Q5JST6 749 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 KIAA1614Q5VZ46 1190 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 MFSD7Q6UXD7 560 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 TMC5Q6UXY8 1006 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 SPOCD1Q6ZMY3 1216 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 OVCH2Q7RTZ1 564 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 SAMD14Q8IZD0 417 aaPredicted RBP8.18□□□□□ -1.1
SCARB2-220ENST00000640076 OR2C3Q8N628 320 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 NKAIN3Q8N8D7 197 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 SMG7Q92540 1137 aaKnown RBP8.18□□□□□ -1.1
SCARB2-220ENST00000640076 TCEAL4Q96EI5 215 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 TEKT5Q96M29 485 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 INSM2Q96T92 566 aaPredicted RBP8.18□□□□□ -1.1
SCARB2-220ENST00000640076 OSBPL8Q9BZF1 889 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 ATXN3LQ9H3M9 355 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 ZFAND3Q9H8U3 227 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 PCDH18Q9HCL0 1135 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 SMYD2Q9NRG4 433 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 MTCH2Q9Y6C9 303 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 IKBKGQ9Y6K9 419 aa8.18□□□□□ -1.1
SCARB2-220ENST00000640076 GSTP1P09211 210 aaKnown RBP8.17□□□□□ -1.1
SCARB2-220ENST00000640076 SRGAP2BP0DMP2 458 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 SLC2A3P11169 496 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 PFKLP17858 780 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 HDCP19113 662 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 IL4RP24394 825 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 PTPN7P35236 360 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 CETN2P41208 172 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 KCNQ1P51787 676 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 COG7P83436 770 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 CKAP4Q07065 602 aaKnown RBP8.17□□□□□ -1.1
SCARB2-220ENST00000640076 SEMA3BQ13214 749 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 ADAM15Q13444 863 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 KRT81Q14533 505 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 TFDP3Q5H9I0 405 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 PPP6R3Q5H9R7 873 aaPredicted RBP8.17□□□□□ -1.1
SCARB2-220ENST00000640076 PRSS36Q5K4E3 855 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 STXBP5Q5T5C0 1151 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 FAAH2Q6GMR7 532 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 ZNF449Q6P9G9 518 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 HDXQ7Z353 690 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 VSIG1Q86XK7 387 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 PTRH1Q86Y79 214 aaKnown RBP8.17□□□□□ -1.1
SCARB2-220ENST00000640076 SLC13A5Q86YT5 568 aaPredicted RBP8.17□□□□□ -1.1
SCARB2-220ENST00000640076 MAP7D3Q8IWC1 876 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 PYROXD2Q8N2H3 581 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 ARL14EPQ8N8R7 260 aaPredicted RBP8.17□□□□□ -1.1
SCARB2-220ENST00000640076 CHTF18Q8WVB6 975 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 HAPLN3Q96S86 360 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 CYP2S1Q96SQ9 504 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 CALN1Q9BXU9 219 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 PIDD1Q9HB75 910 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 XPO7Q9UIA9 1087 aaKnown RBP8.17□□□□□ -1.1
SCARB2-220ENST00000640076 POLHQ9Y253 713 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 XIRP2A4UGR9 3374 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 PRUNE2Q8WUY3 3088 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 hCG_1818297A0A087WSY0 165 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 TCRBV7S2A1N4TA0A589 114 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 ZNF487B1APH4 448 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 FAM72CH0Y354 149 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 ZNF197O14709 1029 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 APOEP02649 317 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 CKMP06732 381 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 HMBSP08397 361 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 MBL2P11226 248 aaPredicted RBP8.17□□□□□ -1.1
SCARB2-220ENST00000640076 KRT10P13645 584 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 PAFAH1B1P43034 410 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 ADCY2Q08462 1091 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 MAP4K2Q12851 820 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 MMRN1Q13201 1228 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 TEAD2Q15562 447 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 CLUL1Q15846 466 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 DGKKQ5KSL6 1271 aa8.17□□□□□ -1.1
SCARB2-220ENST00000640076 RARS2Q5T160 578 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms