RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 PACSIN3Q9UKS6 424 aa6.73□□□□□ -1.33
RFC1-217ENST00000639695 MKLN1Q9UL63 735 aa6.73□□□□□ -1.33
RFC1-217ENST00000639695 A4GNTQ9UNA3 340 aa6.73□□□□□ -1.33
RFC1-217ENST00000639695 ADAM18Q9Y3Q7 739 aa6.73□□□□□ -1.33
RFC1-217ENST00000639695 PCDHGB5Q9Y5G0 923 aa6.73□□□□□ -1.33
RFC1-217ENST00000639695 CAPN7Q9Y6W3 813 aa6.73□□□□□ -1.33
RFC1-217ENST00000639695 FAM169AQ9Y6X4 670 aa6.73□□□□□ -1.33
RFC1-217ENST00000639695 COL4A3Q01955 1670 aa6.73□□□□□ -1.33
RFC1-217ENST00000639695 SPATA31A5Q5VU36 1347 aa6.73□□□□□ -1.33
RFC1-217ENST00000639695 SPATA31A6Q5VVP1 1343 aa6.73□□□□□ -1.33
RFC1-217ENST00000639695 SPATA31A7Q8IWB4 1347 aa6.73□□□□□ -1.33
RFC1-217ENST00000639695 CENPVL1A0A0U1RR11 272 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 H0YIZ8 118 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 EXOC3O60645 756 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 SERPINC1P01008 464 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 IL1AP01583 271 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 UBA7P41226 1012 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 KRT83P78385 493 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 IRF3Q14653 427 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 KCNB1Q14721 858 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 ANXA2RQ3ZCQ2 193 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 FBXO43Q4G163 708 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 C1orf141Q5JVX7 400 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 GKAP1Q5VSY0 366 aaPredicted RBP6.72□□□□□ -1.33
RFC1-217ENST00000639695 TSSK4Q6SA08 328 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 C16orf71Q8IYS4 520 aaPredicted RBP6.72□□□□□ -1.33
RFC1-217ENST00000639695 SCML4Q8N228 414 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 TERB1Q8NA31 727 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 GTF3C6Q969F1 213 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 ZNF653Q96CK0 615 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 KAZALD1Q96I82 304 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 CCDC17Q96LX7 622 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 WDFY2Q96P53 400 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 BBC3Q96PG8 261 aaPredicted RBP6.72□□□□□ -1.33
RFC1-217ENST00000639695 IFT27Q9BW83 186 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 POLR1BQ9H9Y6 1135 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 FBXO40Q9UH90 709 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 ZNHIT2Q9UHR6 403 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 TNFSF13BQ9Y275 285 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.72□□□□□ -1.33
RFC1-217ENST00000639695 CLDN16Q9Y5I7 305 aa6.72□□□□□ -1.33
RFC1-217ENST00000639695 CLGNO14967 610 aa6.71□□□□□ -1.34
RFC1-217ENST00000639695 LIASO43766 372 aa6.71□□□□□ -1.34
RFC1-217ENST00000639695 ENTPD3O75355 529 aa6.71□□□□□ -1.34
RFC1-217ENST00000639695 SEC31AO94979 1220 aaKnown RBP6.71□□□□□ -1.34
RFC1-217ENST00000639695 OR2C1O95371 312 aa6.71□□□□□ -1.34
RFC1-217ENST00000639695 RB1P06400 928 aa6.71□□□□□ -1.34
RFC1-217ENST00000639695 PRR35P0CG20 571 aa6.71□□□□□ -1.34
RFC1-217ENST00000639695 FCGR2AP12318 317 aa6.71□□□□□ -1.34
RFC1-217ENST00000639695 PCSK6P29122 969 aa6.71□□□□□ -1.34
RFC1-217ENST00000639695 UBXN2AP68543 259 aa6.71□□□□□ -1.34
RFC1-217ENST00000639695 MRPS21P82921 87 aaKnown RBP6.71□□□□□ -1.34
RFC1-217ENST00000639695 SEMA3AQ14563 771 aa6.71□□□□□ -1.34
RFC1-217ENST00000639695 HIST2H2ACQ16777 129 aaPredicted RBP6.71□□□□□ -1.34
RFC1-217ENST00000639695 PFKFB3Q16875 520 aaPredicted RBP6.71□□□□□ -1.34
RFC1-217ENST00000639695 ZSCAN23Q3MJ62 389 aa6.71□□□□□ -1.34
RFC1-217ENST00000639695 C10orf76Q5T2E6 689 aa6.71□□□□□ -1.34
RFC1-217ENST00000639695 CPLX2Q6PUV4 134 aaKnown RBP6.71□□□□□ -1.34
RFC1-217ENST00000639695 DHRS13Q6UX07 377 aa6.71□□□□□ -1.34
RFC1-217ENST00000639695 GALNTL5Q7Z4T8 443 aa6.71□□□□□ -1.34
RFC1-217ENST00000639695 MDGA2Q7Z553 956 aa6.71□□□□□ -1.34
RFC1-217ENST00000639695 BCDIN3DQ7Z5W3 292 aaKnown RBP6.71□□□□□ -1.34
RFC1-217ENST00000639695 ADGRA1Q86SQ6 560 aa6.71□□□□□ -1.34
RFC1-217ENST00000639695 GPAT4Q86UL3 456 aa6.71□□□□□ -1.34
RFC1-217ENST00000639695 GALNT13Q8IUC8 556 aa6.71□□□□□ -1.34
RFC1-217ENST00000639695 TTC30BQ8N4P2 665 aa6.71□□□□□ -1.34
RFC1-217ENST00000639695 CELF1Q92879 486 aaKnown RBP6.71□□□□□ -1.34
RFC1-217ENST00000639695 RIOX1Q9H6W3 641 aa6.71□□□□□ -1.34
RFC1-217ENST00000639695 SCPEP1Q9HB40 452 aa6.71□□□□□ -1.34
RFC1-217ENST00000639695 ARL8BQ9NVJ2 186 aa6.71□□□□□ -1.34
RFC1-217ENST00000639695 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.71□□□□□ -1.341e-6■□□□□ 8.6
RFC1-217ENST00000639695 C17orf100A8MU93 164 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 USP17L23D6RBM5 183 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 UBE2CO00762 179 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 CTDSP2O14595 271 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 SCAMP1O15126 338 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 ADAP00813 363 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 SCG2P13521 617 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 AKR1A1P14550 325 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 SLC2A4P14672 509 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 TBXAS1P24557 533 aaPredicted RBP6.7□□□□□ -1.34
RFC1-217ENST00000639695 GRIA3P42263 894 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 PTPN9P43378 593 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 CCT8P50990 548 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 HSD17B4P51659 736 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 PPP2R5BQ15173 497 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 C5orf22Q49AR2 442 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 TCP11X2Q5H9J9 407 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 CC2D1BQ5T0F9 858 aaKnown RBP6.7□□□□□ -1.34
RFC1-217ENST00000639695 FAM171A1Q5VUB5 890 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 KCNV1Q6PIU1 500 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 RANBP10Q6VN20 620 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 Q6ZNX1 250 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 DNAAF5Q86Y56 855 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 UEVLDQ8IX04 471 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 LCORLQ8N3X6 602 aa6.7□□□□□ -1.34
RFC1-217ENST00000639695 SYT2Q8N9I0 419 aaPredicted RBP6.7□□□□□ -1.34
RFC1-217ENST00000639695 PRPF31Q8WWY3 499 aaKnown RBP6.7□□□□□ -1.34
RFC1-217ENST00000639695 PSPC1Q8WXF1 523 aaKnown RBP6.7□□□□□ -1.34
RFC1-217ENST00000639695 DAZAP1Q96EP5 407 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms