RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 CCNG2Q16589 344 aa19.69■□□□□ 0.74
HLA-A-209ENST00000638375 MYLK3Q32MK0 819 aa19.69■□□□□ 0.74
HLA-A-209ENST00000638375 RASSF3Q86WH2 238 aa19.69■□□□□ 0.74
HLA-A-209ENST00000638375 CACUL1Q86Y37 369 aa19.69■□□□□ 0.74
HLA-A-209ENST00000638375 TMPRSS6Q8IU80 811 aa19.69■□□□□ 0.74
HLA-A-209ENST00000638375 RYBPQ8N488 228 aaPredicted RBP19.69■□□□□ 0.74
HLA-A-209ENST00000638375 MDGA1Q8NFP4 955 aa19.69■□□□□ 0.74
HLA-A-209ENST00000638375 NKD2Q969F2 451 aaPredicted RBP19.69■□□□□ 0.74
HLA-A-209ENST00000638375 MRGPRX1Q96LB2 322 aa19.69■□□□□ 0.74
HLA-A-209ENST00000638375 NAP1L3Q99457 506 aaPredicted RBP19.69■□□□□ 0.74
HLA-A-209ENST00000638375 HEPHQ9BQS7 1158 aa19.69■□□□□ 0.74
HLA-A-209ENST00000638375 AP1M1Q9BXS5 423 aa19.69■□□□□ 0.74
HLA-A-209ENST00000638375 AMACRQ9UHK6 382 aa19.69■□□□□ 0.74
HLA-A-209ENST00000638375 SARDHQ9UL12 918 aa19.69■□□□□ 0.74
HLA-A-209ENST00000638375 PPM1HQ9ULR3 514 aa19.69■□□□□ 0.74
HLA-A-209ENST00000638375 ATP8A1Q9Y2Q0 1164 aa19.69■□□□□ 0.74
HLA-A-209ENST00000638375 KIF2AO00139 706 aaPredicted RBP19.68■□□□□ 0.74
HLA-A-209ENST00000638375 PDE2AO00408 941 aaPredicted RBP19.68■□□□□ 0.74
HLA-A-209ENST00000638375 KCNN4O15554 427 aa19.68■□□□□ 0.74
HLA-A-209ENST00000638375 MTSS1O43312 755 aa19.68■□□□□ 0.74
HLA-A-209ENST00000638375 TUBB4AP04350 444 aa19.68■□□□□ 0.74
HLA-A-209ENST00000638375 CSNK1DP48730 415 aa19.68■□□□□ 0.74
HLA-A-209ENST00000638375 PXNP49023 591 aaPredicted RBP19.68■□□□□ 0.74
HLA-A-209ENST00000638375 NSUN2Q08J23 767 aaKnown RBP eCLIP19.68■□□□□ 0.74
HLA-A-209ENST00000638375 DMWDQ09019 674 aa19.68■□□□□ 0.74
HLA-A-209ENST00000638375 BYSLQ13895 437 aaKnown RBP19.68■□□□□ 0.74
HLA-A-209ENST00000638375 TEX44Q53QW1 395 aa19.68■□□□□ 0.74
HLA-A-209ENST00000638375 ZNF776Q68DI1 518 aaPredicted RBP19.68■□□□□ 0.74
HLA-A-209ENST00000638375 ALG1LQ6GMV1 187 aa19.68■□□□□ 0.74
HLA-A-209ENST00000638375 DRICH1Q6PGQ1 229 aaPredicted RBP19.68■□□□□ 0.74
HLA-A-209ENST00000638375 SRLQ86TD4 932 aa19.68■□□□□ 0.74
HLA-A-209ENST00000638375 MMAAQ8IVH4 418 aaKnown RBP19.68■□□□□ 0.74
HLA-A-209ENST00000638375 ZNF567Q8N184 647 aa19.68■□□□□ 0.74
HLA-A-209ENST00000638375 CAMKK1Q8N5S9 505 aa19.68■□□□□ 0.74
HLA-A-209ENST00000638375 GRIN3AQ8TCU5 1115 aa19.68■□□□□ 0.74
HLA-A-209ENST00000638375 TMEM121Q9BTD3 319 aa19.68■□□□□ 0.74
HLA-A-209ENST00000638375 ZDHHC6Q9H6R6 413 aa19.68■□□□□ 0.74
HLA-A-209ENST00000638375 CUL9Q8IWT3 2517 aa19.67■□□□□ 0.74
HLA-A-209ENST00000638375 KRIT1O00522 736 aa19.67■□□□□ 0.74
HLA-A-209ENST00000638375 NEBLO76041 1014 aa19.67■□□□□ 0.74
HLA-A-209ENST00000638375 ALDH1A2O94788 518 aa19.67■□□□□ 0.74
HLA-A-209ENST00000638375 POP4O95707 220 aaKnown RBP19.67■□□□□ 0.74
HLA-A-209ENST00000638375 PSMD8P48556 350 aa19.67■□□□□ 0.74
HLA-A-209ENST00000638375 SCNN1BP51168 640 aa19.67■□□□□ 0.74
HLA-A-209ENST00000638375 METAP1P53582 386 aa19.67■□□□□ 0.74
HLA-A-209ENST00000638375 GDF10P55107 478 aa19.67■□□□□ 0.74
HLA-A-209ENST00000638375 NIPAL4Q0D2K0 466 aa19.67■□□□□ 0.74
HLA-A-209ENST00000638375 ARSIQ5FYB1 569 aa19.67■□□□□ 0.74
HLA-A-209ENST00000638375 ARRDC2Q8TBH0 407 aa19.67■□□□□ 0.74
HLA-A-209ENST00000638375 PIP4K2CQ8TBX8 421 aa19.67■□□□□ 0.74
HLA-A-209ENST00000638375 ZNF592Q92610 1267 aa19.67■□□□□ 0.74
HLA-A-209ENST00000638375 TEKT5Q96M29 485 aa19.67■□□□□ 0.74
HLA-A-209ENST00000638375 AGAP3Q96P47 875 aa19.67■□□□□ 0.74
HLA-A-209ENST00000638375 NUDCD1Q96RS6 583 aa19.67■□□□□ 0.74
HLA-A-209ENST00000638375 POLR1EQ9GZS1 481 aaKnown RBP19.67■□□□□ 0.74
HLA-A-209ENST00000638375 IL36AQ9UHA7 158 aa19.67■□□□□ 0.74
HLA-A-209ENST00000638375 FARP1Q9Y4F1 1045 aaPredicted RBP19.67■□□□□ 0.74
HLA-A-209ENST00000638375 TTLL3Q9Y4R7 772 aa19.67■□□□□ 0.74
HLA-A-209ENST00000638375 CACNA1IQ9P0X4 2223 aa19.67■□□□□ 0.74
HLA-A-209ENST00000638375 ZBTB24O43167 697 aaPredicted RBP19.66■□□□□ 0.74
HLA-A-209ENST00000638375 RNASEH1O60930 286 aaKnown RBP19.66■□□□□ 0.74
HLA-A-209ENST00000638375 LEFTY1O75610 366 aa19.66■□□□□ 0.74
HLA-A-209ENST00000638375 IL1BP01584 269 aa19.66■□□□□ 0.74
HLA-A-209ENST00000638375 HOXA6P31267 233 aa19.66■□□□□ 0.74
HLA-A-209ENST00000638375 CD68P34810 354 aaPredicted RBP19.66■□□□□ 0.74
HLA-A-209ENST00000638375 AP1S1P61966 158 aa19.66■□□□□ 0.74
HLA-A-209ENST00000638375 DSC2Q02487 901 aa19.66■□□□□ 0.74
HLA-A-209ENST00000638375 CSTF1Q05048 431 aaKnown RBP19.66■□□□□ 0.74
HLA-A-209ENST00000638375 ITKQ08881 620 aa19.66■□□□□ 0.74
HLA-A-209ENST00000638375 IHHQ14623 411 aa19.66■□□□□ 0.74
HLA-A-209ENST00000638375 CST6Q15828 149 aa19.66■□□□□ 0.74
HLA-A-209ENST00000638375 CYP1B1Q16678 543 aa19.66■□□□□ 0.74
HLA-A-209ENST00000638375 NCEH1Q6PIU2 408 aa19.66■□□□□ 0.74
HLA-A-209ENST00000638375 KIAA1324Q6UXG2 1013 aaKnown RBP19.66■□□□□ 0.74
HLA-A-209ENST00000638375 DSG4Q86SJ6 1040 aa19.66■□□□□ 0.74
HLA-A-209ENST00000638375 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.66■□□□□ 0.74
HLA-A-209ENST00000638375 FAM71DQ8N9W8 422 aa19.66■□□□□ 0.74
HLA-A-209ENST00000638375 C12orf50Q8NA57 414 aaPredicted RBP19.66■□□□□ 0.74
HLA-A-209ENST00000638375 TMIEQ8NEW7 156 aa19.66■□□□□ 0.74
HLA-A-209ENST00000638375 SIPA1Q96FS4 1042 aa19.66■□□□□ 0.74
HLA-A-209ENST00000638375 VAT1Q99536 393 aa19.66■□□□□ 0.74
HLA-A-209ENST00000638375 SEMA3CQ99985 751 aa19.66■□□□□ 0.74
HLA-A-209ENST00000638375 TPSD1Q9BZJ3 242 aa19.66■□□□□ 0.74
HLA-A-209ENST00000638375 NOD2Q9HC29 1040 aa19.66■□□□□ 0.74
HLA-A-209ENST00000638375 CD93Q9NPY3 652 aa19.66■□□□□ 0.74
HLA-A-209ENST00000638375 SCUBE2Q9NQ36 999 aa19.66■□□□□ 0.74
HLA-A-209ENST00000638375 BCCIPQ9P287 314 aaKnown RBP eCLIP19.66■□□□□ 0.74
HLA-A-209ENST00000638375 KLHL8Q9P2G9 620 aaPredicted RBP19.66■□□□□ 0.74
HLA-A-209ENST00000638375 EBF1Q9UH73 591 aa19.66■□□□□ 0.74
HLA-A-209ENST00000638375 FBXO4Q9UKT5 387 aa19.66■□□□□ 0.74
HLA-A-209ENST00000638375 CFAP69A5D8W1 941 aa19.65■□□□□ 0.74
HLA-A-209ENST00000638375 MID1O15344 667 aa19.65■□□□□ 0.74
HLA-A-209ENST00000638375 GALR2O43603 387 aaPredicted RBP19.65■□□□□ 0.74
HLA-A-209ENST00000638375 PIGNO95427 931 aa19.65■□□□□ 0.74
HLA-A-209ENST00000638375 PRNPP04156 253 aa19.65■□□□□ 0.74
HLA-A-209ENST00000638375 ITGAVP06756 1048 aa19.65■□□□□ 0.74
HLA-A-209ENST00000638375 SLC8A1P32418 973 aa19.65■□□□□ 0.74
HLA-A-209ENST00000638375 KCNJ1P48048 391 aa19.65■□□□□ 0.74
HLA-A-209ENST00000638375 RAD51Q06609 339 aa19.65■□□□□ 0.74
HLA-A-209ENST00000638375 ANGPT1Q15389 498 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms