RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 HSP90AA5PQ58FG0 334 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 ZNF783Q6ZMS7 281 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 CDHR3Q6ZTQ4 885 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 MICALCLQ6ZW33 695 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 MRPL43Q8N983 215 aaKnown RBP12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 HJURPQ8NCD3 748 aaPredicted RBP12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 SPPL3Q8TCT6 385 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 FAM111AQ96PZ2 611 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 GCNAQ96QF7 691 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 AGAP2Q99490 1192 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 RBBP8Q99708 897 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 SEMA3CQ99985 751 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 SPON2Q9BUD6 331 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 PRKD2Q9BZL6 878 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 IQCGQ9H095 443 aaKnown RBP12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 VPS11Q9H270 941 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 MTIF3Q9H2K0 278 aaKnown RBP12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 C12orf65Q9H3J6 166 aaKnown RBP12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 C20orf96Q9NUD7 363 aaPredicted RBP12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 PCMTD2Q9NV79 361 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 UBA2Q9UBT2 640 aaPredicted RBP12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 SEPT3Q9UH03 358 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 RWDD3Q9Y3V2 267 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 MTCL1Q9Y4B5 1905 aaKnown RBP12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 SNX3O60493 162 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 C1RP00736 705 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 CKMP06732 381 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 SYN1P17600 705 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 PFKLP17858 780 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 GLDCP23378 1020 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 DNAJB1P25685 340 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 SPRP35270 261 aaPredicted RBP12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 NUMBP49757 651 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 LIMK2P53671 638 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 UBE3AQ05086 875 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 C6orf89Q6UWU4 347 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 KDELC2Q7Z4H8 507 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 STRA8Q7Z7C7 330 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 SLC25A41Q8N5S1 370 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 MAB21L3Q8N8X9 362 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 CCDC197Q8NCU1 140 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 LRRC8CQ8TDW0 803 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 SLC22A17Q8WUG5 538 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 POF1BQ8WVV4 589 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 ISL2Q96A47 359 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 PSKH2Q96QS6 385 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 RANBP9Q96S59 729 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 ELAC2Q9BQ52 826 aaKnown RBP12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 MCMBPQ9BTE3 642 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 CINPQ9BW66 212 aaPredicted RBP12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 ASAH2Q9NR71 780 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 TLR9Q9NR96 1032 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 TREX1Q9NSU2 369 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 NSMCE4AQ9NXX6 385 aa12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 LSM7Q9UK45 103 aaKnown RBP12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 ATXN2Q99700 1313 aaKnown RBP12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 HELZP42694 1942 aaKnown RBP12.4□□□□□ -0.42
CACNA1D-228ENST00000638120 TRAV19A0A0A6YYK7 116 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 LOC285095A0A1B0GVY8 99 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 A0A1W2PRU2 124 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 TTC24A2A3L6 582 aaPredicted RBP12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 CCDC78A2IDD5 438 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 HEATR9A2RTY3 570 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 TYW5A2RUC4 315 aaKnown RBP12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 LINC01553A4QN01 128 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 TPP1O14773 563 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 SCAMP3O14828 347 aaKnown RBP12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 TBL1XO60907 577 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 CSPG5O95196 566 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 LUC7L3O95232 432 aaKnown RBP12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 ATXN1LP0C7T5 689 aaKnown RBP12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 CRHR1P34998 444 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 SERPINH1P50454 418 aaKnown RBP12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 CLCN4P51793 760 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 MSLNQ13421 630 aaPredicted RBP12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 SEPT6Q14141 434 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 SLC14A2Q15849 920 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 PPM1LQ5SGD2 360 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 RNF219Q5W0B1 726 aaPredicted RBP12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 KIAA0930Q6ICG6 404 aaPredicted RBP12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 ESRP1Q6NXG1 681 aaKnown RBP12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 RTL10Q7L3V2 364 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 CNTN4Q8IWV2 1026 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 NDUFAF2Q8N183 169 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 SPOCK2Q92563 424 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 FEM1CQ96JP0 617 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 CORO1BQ9BR76 489 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 C17orf80Q9BSJ5 609 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 MUC3BQ9H195 1237 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 IARS2Q9NSE4 1012 aaKnown RBP12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 PLLPQ9Y342 182 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 ACTL7AQ9Y615 435 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 C5orf67F2Z3F1 127 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 NRG2O14511 850 aaPredicted RBP12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 CCL16O15467 120 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 GJB3O75712 270 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 SERPINF2P08697 491 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 MYL4P12829 197 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 PAMP19021 973 aa12.39□□□□□ -0.43
CACNA1D-228ENST00000638120 HLA-DPA1P20036 260 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms