RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 ACTR3P61158 418 aa15.76■□□□□ 0.11
CLN8-209ENST00000635970 SLC25A11Q02978 314 aaKnown RBP15.76■□□□□ 0.11
CLN8-209ENST00000635970 BIRC2Q13490 618 aa15.76■□□□□ 0.11
CLN8-209ENST00000635970 DPYSL3Q14195 570 aa15.76■□□□□ 0.11
CLN8-209ENST00000635970 TMCO4Q5TGY1 634 aa15.76■□□□□ 0.11
CLN8-209ENST00000635970 PM20D1Q6GTS8 502 aa15.76■□□□□ 0.11
CLN8-209ENST00000635970 HFE2Q6ZVN8 426 aa15.76■□□□□ 0.11
CLN8-209ENST00000635970 MYLK4Q86YV6 388 aaPredicted RBP15.76■□□□□ 0.11
CLN8-209ENST00000635970 RNF135Q8IUD6 432 aa15.76■□□□□ 0.11
CLN8-209ENST00000635970 SCUBE3Q8IX30 993 aa15.76■□□□□ 0.11
CLN8-209ENST00000635970 RIN3Q8TB24 985 aa15.76■□□□□ 0.11
CLN8-209ENST00000635970 SMARCD2Q92925 531 aa15.76■□□□□ 0.11
CLN8-209ENST00000635970 TTC17Q96AE7 1141 aa15.76■□□□□ 0.11
CLN8-209ENST00000635970 HAUS1Q96CS2 278 aa15.76■□□□□ 0.11
CLN8-209ENST00000635970 MTBPQ96DY7 904 aa15.76■□□□□ 0.11
CLN8-209ENST00000635970 DTNBP1Q96EV8 351 aa15.76■□□□□ 0.11
CLN8-209ENST00000635970 PIWIL1Q96J94 861 aaKnown RBP15.76■□□□□ 0.11
CLN8-209ENST00000635970 PLA2G2FQ9BZM2 168 aa15.76■□□□□ 0.11
CLN8-209ENST00000635970 TEX264Q9Y6I9 313 aa15.76■□□□□ 0.11
CLN8-209ENST00000635970 TRAV19A0A0A6YYK7 116 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 TCRBV9S1A1TA0A576 114 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 ANHXE9PGG2 379 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 GOLGA8RI6L899 631 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 CHADO15335 359 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 COCHO43405 550 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 TBX18O95935 607 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 ERBB2P04626 1255 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 SNRPAP09012 282 aaKnown RBP15.75■□□□□ 0.11
CLN8-209ENST00000635970 BGNP21810 368 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 PPP3CCP48454 512 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 OGDHQ02218 1023 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 RNF220Q5VTB9 566 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 TTC16Q8NEE8 873 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 USP13Q92995 863 aaPredicted RBP15.75■□□□□ 0.11
CLN8-209ENST00000635970 SERAC1Q96JX3 654 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 WDR83Q9BRX9 315 aaKnown RBP15.75■□□□□ 0.11
CLN8-209ENST00000635970 NMUR2Q9GZQ4 415 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 VCX3BQ9H321 246 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 STN1Q9H668 368 aaKnown RBP15.75■□□□□ 0.11
CLN8-209ENST00000635970 CNGB3Q9NQW8 809 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 PLLPQ9Y342 182 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 EIF4E1BA6NMX2 242 aaKnown RBP15.75■□□□□ 0.11
CLN8-209ENST00000635970 PAPSS1O43252 624 aaPredicted RBP15.75■□□□□ 0.11
CLN8-209ENST00000635970 TLR5O60602 858 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 BANF1O75531 89 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 PYGBP11216 843 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 ANPEPP15144 967 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 HDCP19113 662 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 PSMA2P25787 234 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 RPL26P61254 145 aaKnown RBP15.75■□□□□ 0.11
CLN8-209ENST00000635970 YWHAGP61981 247 aaKnown RBP eCLIP15.75■□□□□ 0.11
CLN8-209ENST00000635970 ZXDBP98169 803 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 XIAPP98170 497 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 TXNRD3NBQ6F5E7 133 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 KHSRPQ92945 711 aaKnown RBP eCLIP15.75■□□□□ 0.11
CLN8-209ENST00000635970 LRRC3BQ96PB8 259 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 VCX3AQ9NNX9 186 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 NDE1Q9NXR1 346 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 MUTYHQ9UIF7 546 aa15.75■□□□□ 0.11
CLN8-209ENST00000635970 TTC28Q96AY4 2481 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 TICRRQ7Z2Z1 1910 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 MDM4O15151 490 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 BIRC5O15392 142 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 TMEM63AO94886 807 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 OLFM2O95897 454 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 ELK3P41970 407 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 GDF10P55107 478 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 GRM2Q14416 872 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 KBTBD12Q3ZCT8 623 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 HECTD3Q5T447 861 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 MTSS1LQ765P7 747 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 TMEM110Q86TL2 294 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 CRLF3Q8IUI8 442 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 DTX3LQ8TDB6 740 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 EDEM1Q92611 657 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 E2F7Q96AV8 911 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 LRRC39Q96DD0 335 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 OLFM3Q96PB7 478 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 SRPK1Q96SB4 655 aaKnown RBP15.74■□□□□ 0.11
CLN8-209ENST00000635970 COL25A1Q9BXS0 654 aaPredicted RBP15.74■□□□□ 0.11
CLN8-209ENST00000635970 ZFP14Q9HCL3 533 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 ARHGEF4Q9NR80 690 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.74■□□□□ 0.11
CLN8-209ENST00000635970 SMPD4Q9NXE4 827 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 SIRPGQ9P1W8 387 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 PLA2G4CQ9UP65 541 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 NCOR1O75376 2440 aa15.74■□□□□ 0.11
CLN8-209ENST00000635970 HEPACAM2A8MVW5 462 aa15.73■□□□□ 0.11
CLN8-209ENST00000635970 LYNP07948 512 aa15.73■□□□□ 0.11
CLN8-209ENST00000635970 SERPINA6P08185 405 aa15.73■□□□□ 0.11
CLN8-209ENST00000635970 KRT3P12035 628 aa15.73■□□□□ 0.11
CLN8-209ENST00000635970 CCNFP41002 786 aa15.73■□□□□ 0.11
CLN8-209ENST00000635970 ACADSBP45954 432 aa15.73■□□□□ 0.11
CLN8-209ENST00000635970 EIF3EP60228 445 aaKnown RBP15.73■□□□□ 0.11
CLN8-209ENST00000635970 HNRNPDQ14103 355 aaKnown RBP15.73■□□□□ 0.11
CLN8-209ENST00000635970 VITQ6UXI7 678 aa15.73■□□□□ 0.11
CLN8-209ENST00000635970 FAM183BPQ6ZVS7 135 aa15.73■□□□□ 0.11
CLN8-209ENST00000635970 ARCQ7LC44 396 aa15.73■□□□□ 0.11
CLN8-209ENST00000635970 PIP4K2CQ8TBX8 421 aa15.73■□□□□ 0.11
CLN8-209ENST00000635970 KLF6Q99612 283 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms