RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 BUD31P41223 144 aaPredicted RBP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 TTPAP49638 278 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 PFKPQ01813 784 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 FRG1Q14331 258 aaKnown RBP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 CBX2Q14781 532 aaPredicted RBP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 OASLQ15646 514 aaKnown RBP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 HSDL1Q3SXM5 330 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 ZFP1Q6P2D0 407 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 CHSY3Q70JA7 882 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 TTC7BQ86TV6 843 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 FMR1NBQ8N0W7 255 aaPredicted RBP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 ZCCHC7Q8N3Z6 543 aaKnown RBP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 KAT5Q92993 513 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 RNF31Q96EP0 1072 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 RNF145Q96MT1 663 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 CATSPER2Q96P56 530 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 RNF121Q9H920 327 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 MARCH2Q9P0N8 246 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 ERGIC3Q9Y282 383 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 PCDHA3Q9Y5H8 950 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 A0A0J9YVX5 310 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 G3V2T6 193 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 FKTNO75072 461 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 FKBP6O75344 327 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 PEX14O75381 377 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 ZNF432O94892 652 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 BPNT1O95861 308 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 S100A6P06703 90 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 CYP11B2P19099 503 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 IL12BP29460 328 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 RASGEF1BQ0VAM2 473 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 PYDC2Q56P42 97 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 RAP1GAP2Q684P5 730 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 SGMS1Q86VZ5 419 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 RASSF5Q8WWW0 418 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 NELL1Q92832 810 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 UNKQ9C0B0 810 aaKnown RBP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 PXMP2Q9NR77 195 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 C1orf232A0A0U1RR37 186 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 H0Y858 1186 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 SH3BGRLO75368 114 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 PGK1P00558 417 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 HDCP19113 662 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 EIF4BP23588 611 aaKnown RBP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 ERVK-9P63128 1117 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 MKRN4PQ13434 485 aaPredicted RBP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 PCNX4Q63HM2 1172 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 ZNF549Q6P9A3 640 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 TRIM40Q6P9F5 258 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 LPCAT2Q7L5N7 544 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 GALNTL5Q7Z4T8 443 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 SPATA20Q8TB22 786 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 RXFP2Q8WXD0 754 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 CD101Q93033 1021 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 MYDGFQ969H8 173 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 COX4I2Q96KJ9 171 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 ASB8Q9H765 288 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 PRDM16Q9HAZ2 1276 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 TCF7L2Q9NQB0 619 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 NKIRAS2Q9NYR9 191 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 MTRRQ9UBK8 725 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 ERVK-11Q9UQG0 969 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 TNS3Q68CZ2 1445 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 PTGES3LE9PB15 166 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 TBL1XO60907 577 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 USP17L7P0C7H9 530 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 VARSP26640 1264 aaKnown RBP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 RASA2Q15283 850 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 SF1Q15637 639 aaKnown RBP5.61□□□□□ -1.51
SCN1A-209ENST00000635750 MAPK14Q16539 360 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 POM121L1PQ3SYA9 428 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 CDYL2Q8N8U2 506 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 MAP3K14Q99558 947 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 MTFR1LQ9H019 292 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 SPATC1LQ9H0A9 340 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 TLE6Q9H808 572 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 AGPAT3Q9NRZ7 376 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 ING4Q9UNL4 249 aa5.61□□□□□ -1.51
SCN1A-209ENST00000635750 FAM86C2PA6NEL3 165 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 PGRMC2O15173 223 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 MAP3K6O95382 1288 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 MLYCDO95822 493 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 ETS1P14921 441 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 OGNP20774 298 aaKnown RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 TAS2R50P59544 299 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 IRF8Q02556 426 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 NAA30Q147X3 362 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 EIF2S3LQ2VIR3 472 aaKnown RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 CCSAPQ6IQ19 270 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 SLC27A1Q6PCB7 646 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 METTL7BQ6UX53 244 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 ARHGEF19Q8IW93 802 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 C12orf50Q8NA57 414 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 FBXO22Q8NEZ5 403 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 PIGKQ92643 395 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 POP5Q969H6 163 aaKnown RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 HIC2Q96JB3 615 aa5.6□□□□□ -1.51
SCN1A-209ENST00000635750 PRICKLE1Q96MT3 831 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 TEFMQ96QE5 360 aaKnown RBP5.6□□□□□ -1.51
SCN1A-209ENST00000635750 ISCUQ9H1K1 167 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms