RNA–Protein interactions for RNA: ENST00000627460.1

CHD2-211, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-211ENST00000627460 HCFC2Q9Y5Z7 792 aa8.77□□□□□ -1.01
CHD2-211ENST00000627460 ANAPC1Q9H1A4 1944 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 CCDC195A0A1B0GUA6 201 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 GOLGA6L7A0A1B0GV03 622 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 A0A1W2PQ67 120 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 HEATR9A2RTY3 570 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 FAM159BA6NKW6 160 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 SMIM23A6NLE4 172 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 LEFTY2O00292 366 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 GFRA2O00451 464 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 FAM155BO75949 473 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 FGF1P05230 155 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 HLA-DQB2P05538 268 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 SNRPAP09012 282 aaKnown RBP8.76□□□□□ -1.01
CHD2-211ENST00000627460 ALADP13716 330 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 ADRA1DP25100 572 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 DNAJB1P25685 340 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 HPDP32754 393 aaPredicted RBP8.76□□□□□ -1.01
CHD2-211ENST00000627460 BMP8BP34820 402 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 SLCO1A2P46721 670 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 PLK1P53350 603 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 PTPN5P54829 565 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 SESN2P58004 480 aaPredicted RBP8.76□□□□□ -1.01
CHD2-211ENST00000627460 GPX6P59796 221 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 RPS24P62847 133 aaKnown RBP8.76□□□□□ -1.01
CHD2-211ENST00000627460 CYP4F8P98187 520 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 MGAT5Q09328 741 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 GRM3Q14832 879 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 SEPT7Q16181 437 aaKnown RBP8.76□□□□□ -1.01
CHD2-211ENST00000627460 DUSP6Q16828 381 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 C9orf50Q5SZB4 431 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 ARTNQ5T4W7 220 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 FYB2Q5VWT5 728 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 PDPK2PQ6A1A2 396 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 UNC5AQ6ZN44 842 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 ZNF534Q76KX8 674 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 TMEM135Q86UB9 458 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 CTAGE3PQ8IX95 158 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 CELF5Q8N6W0 485 aaKnown RBP8.76□□□□□ -1.01
CHD2-211ENST00000627460 OR52K1Q8NGK4 314 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 FIBINQ8TAL6 211 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 UHMK1Q8TAS1 419 aaKnown RBP8.76□□□□□ -1.01
CHD2-211ENST00000627460 SHKBP1Q8TBC3 707 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 SH3RF2Q8TEC5 729 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 DEPDC1BQ8WUY9 529 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 SCG3Q8WXD2 468 aaKnown RBP8.76□□□□□ -1.01
CHD2-211ENST00000627460 SMG7Q92540 1137 aaKnown RBP8.76□□□□□ -1.01
CHD2-211ENST00000627460 ATP2A3Q93084 1043 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 CFAP36Q96G28 342 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 FEM1CQ96JP0 617 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 PWWP2AQ96N64 755 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 MGME1Q9BQP7 344 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 DHRS4Q9BTZ2 278 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 SPON2Q9BUD6 331 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 KIFC1Q9BW19 673 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 CEP41Q9BYV8 373 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 SLC6A16Q9GZN6 736 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 PDFQ9HBH1 243 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 NDFIP2Q9NV92 336 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 OBP2AQ9NY56 170 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 MOCS1Q9NZB8 636 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 ZFATQ9P243 1243 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 VPS28Q9UK41 221 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 RIMKLBQ9ULI2 386 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 SLC8A2Q9UPR5 921 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 MRPS23Q9Y3D9 190 aaKnown RBP8.76□□□□□ -1.01
CHD2-211ENST00000627460 RPS6KL1Q9Y6S9 549 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 CEP350Q5VT06 3117 aa8.76□□□□□ -1.01
CHD2-211ENST00000627460 OBSL1O75147 1896 aa8.75□□□□□ -1.01
CHD2-211ENST00000627460 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.75□□□□□ -1.01
CHD2-211ENST00000627460 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.75□□□□□ -1.01
CHD2-211ENST00000627460 J3KR12 359 aa8.75□□□□□ -1.01
CHD2-211ENST00000627460 PFDN6O15212 129 aa8.75□□□□□ -1.01
CHD2-211ENST00000627460 TM9SF1O15321 606 aa8.75□□□□□ -1.01
CHD2-211ENST00000627460 PRPF4O43172 522 aaKnown RBP eCLIP8.75□□□□□ -1.01
CHD2-211ENST00000627460 SHOX2O60902 331 aaPredicted RBP8.75□□□□□ -1.01
CHD2-211ENST00000627460 ZWINTO95229 277 aa8.75□□□□□ -1.01
CHD2-211ENST00000627460 PAPSS2O95340 614 aaPredicted RBP8.75□□□□□ -1.01
CHD2-211ENST00000627460 PEX11BO96011 259 aa8.75□□□□□ -1.01
CHD2-211ENST00000627460 HOXB8P17481 243 aaPredicted RBP8.75□□□□□ -1.01
CHD2-211ENST00000627460 NFKBIAP25963 317 aa8.75□□□□□ -1.01
CHD2-211ENST00000627460 MGAT1P26572 445 aa8.75□□□□□ -1.01
CHD2-211ENST00000627460 HOXD9P28356 352 aaPredicted RBP8.75□□□□□ -1.01
CHD2-211ENST00000627460 MDH1P40925 334 aaKnown RBP8.75□□□□□ -1.01
CHD2-211ENST00000627460 POLD2P49005 469 aa8.75□□□□□ -1.01
CHD2-211ENST00000627460 SERPINH1P50454 418 aaKnown RBP8.75□□□□□ -1.01
CHD2-211ENST00000627460 WNT3AP56704 352 aa8.75□□□□□ -1.01
CHD2-211ENST00000627460 AP1S1P61966 158 aa8.75□□□□□ -1.01
CHD2-211ENST00000627460 SLC10A7Q0GE19 358 aa8.75□□□□□ -1.01
CHD2-211ENST00000627460 USP4Q13107 963 aa8.75□□□□□ -1.01
CHD2-211ENST00000627460 CRYMQ14894 314 aa8.75□□□□□ -1.01
CHD2-211ENST00000627460 TMED2Q15363 201 aa8.75□□□□□ -1.01
CHD2-211ENST00000627460 TERF2Q15554 542 aa8.75□□□□□ -1.01
CHD2-211ENST00000627460 KBTBD12Q3ZCT8 623 aa8.75□□□□□ -1.01
CHD2-211ENST00000627460 PREPLQ4J6C6 727 aaPredicted RBP8.75□□□□□ -1.01
CHD2-211ENST00000627460 GRTP1Q5TC63 336 aa8.75□□□□□ -1.01
CHD2-211ENST00000627460 RNF219Q5W0B1 726 aaPredicted RBP8.75□□□□□ -1.01
CHD2-211ENST00000627460 RNF43Q68DV7 783 aa8.75□□□□□ -1.01
CHD2-211ENST00000627460 RANBP10Q6VN20 620 aa8.75□□□□□ -1.01
CHD2-211ENST00000627460 MARK2Q7KZI7 788 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms