RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 LIMK1P53667 647 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 AP1S1P61966 158 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 ZNF235Q14590 738 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 TEAD4Q15561 434 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 MYLK3Q32MK0 819 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 AASDHQ4L235 1098 aaPredicted RBP14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 SLC45A4Q5BKX6 768 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 ZNF805Q5CZA5 627 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 DCAF12L1Q5VU92 463 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 FBXL19Q6PCT2 694 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 ERN2Q76MJ5 926 aaKnown RBP14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 TMEM139Q8IV31 216 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 SLC41A1Q8IVJ1 513 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 AADATQ8N5Z0 425 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 FRMD1Q8N878 549 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 OR14C36Q8NHC7 312 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 KIAA1524Q8TCG1 905 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 GRIN3AQ8TCU5 1115 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 NETO1Q8TDF5 533 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 RBM41Q96IZ5 413 aaKnown RBP14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 ZNF641Q96N77 438 aaPredicted RBP14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 PSKH2Q96QS6 385 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 BRD8Q9H0E9 1235 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 ZDHHC6Q9H6R6 413 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 DKK3Q9UBP4 350 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 DMTF1Q9Y222 760 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 ALG6Q9Y672 507 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 WASF2Q9Y6W5 498 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 ZNF292O60281 2723 aa14.22□□□□□ -0.13
SNRPA1-216ENST00000626000 CCDC66A2RUB6 948 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 AP1G1O43747 822 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 RNGTTO60942 597 aaKnown RBP14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 LEFTY1O75610 366 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 ZNF189O75820 626 aaPredicted RBP14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 ZRANB2O95218 330 aaKnown RBP eCLIP14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 TGM1P22735 817 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 CES1P23141 567 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 ITPKAP23677 461 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 IL4RP24394 825 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 AFF3P51826 1226 aaKnown RBP14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 COPS2P61201 443 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 FOXK2Q01167 660 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 GALNT2Q10471 571 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 CNTN1Q12860 1018 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 HNRNPDQ14103 355 aaKnown RBP14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 LBRQ14739 615 aaKnown RBP14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 TRIM61Q5EBN2 209 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 ARSIQ5FYB1 569 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 CFAP58Q5T655 872 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 AGBL4Q5VU57 503 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 IL27RAQ6UWB1 636 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 ARMCX6Q7L4S7 300 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 PRPF39Q86UA1 669 aaKnown RBP14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 TRIM69Q86WT6 500 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 KIAA2013Q8IYS2 634 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 KATNAL2Q8IYT4 538 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 DCLK2Q8N568 766 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 RNF10Q8N5U6 811 aaKnown RBP14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 TPCN2Q8NHX9 752 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 PCDH19Q8TAB3 1148 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 TSGA13Q96PP4 275 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 RNF157Q96PX1 679 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 ATP13A3Q9H7F0 1226 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 CD93Q9NPY3 652 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 SARDHQ9UL12 918 aa14.21□□□□□ -0.13
SNRPA1-216ENST00000626000 TBC1D3DA0A087WVF3 549 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 TBC1D3IA0A087WXS9 549 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 TBC1D3EA0A087X179 549 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 TBC1D3KA0A087X1G2 549 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 TBC1D3FA6NER0 549 aaPredicted RBP14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 MIF4GDA9UHW6 222 aaKnown RBP14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 TBC1D3LB9A6J9 549 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 J3KR12 359 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 APOL1O14791 398 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 PPP1R12AO14974 1030 aaPredicted RBP14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 BCAT2O15382 392 aaPredicted RBP14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 TSPAN6O43657 245 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 KRT86O43790 486 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 MAGEC1O60732 1142 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 NEBLO76041 1014 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 FSBPO95073 299 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 CFIP05156 583 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 CTSLP07711 333 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 TBC1D3HP0C7X1 549 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 CCNCP24863 283 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 SERPINA4P29622 427 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 GARSP41250 739 aaKnown RBP14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 NR2C2P49116 596 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 ATXN3P54252 364 aaPredicted RBP14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 POLR2LP62875 67 aaKnown RBP14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 SETMARQ53H47 684 aaPredicted RBP14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 MARC1Q5VT66 337 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 NCBP2-AS2Q69YL0 99 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 TBC1D3GQ6DHY5 549 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 TBC1D3CQ6IPX1 549 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 KIAA1161Q6NSJ0 714 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 NCEH1Q6PIU2 408 aa14.2□□□□□ -0.14
SNRPA1-216ENST00000626000 BRAT1Q6PJG6 821 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms