RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 UGT2B4P06133 528 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 IGHV4-34P06331 123 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 CD48P09326 243 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 ITGB7P26010 798 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 CDC25BP30305 580 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 SLC1A1P43005 524 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 CCR5P51681 352 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 AFF3P51826 1226 aaKnown RBP14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 NEK3P51956 506 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 NAP1L1P55209 391 aaKnown RBP14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 PUM1Q14671 1186 aaKnown RBP eCLIP14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 TEAD4Q15561 434 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 UAP1L1Q3KQV9 507 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 AFMIDQ63HM1 303 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 ARHGAP12Q8IWW6 846 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 ATPAF2Q8N5M1 289 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 LRIG1Q96JA1 1093 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 EXOC2Q96KP1 924 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 BAG1Q99933 345 aaPredicted RBP14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 RTKNQ9BST9 563 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 CINPQ9BW66 212 aaPredicted RBP14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 OSBPL1AQ9BXW6 950 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 KDM4CQ9H3R0 1056 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 PDFQ9HBH1 243 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 CAPN10Q9HC96 672 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 ETNK2Q9NVF9 386 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 IMPACTQ9P2X3 320 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 IPO11Q9UI26 975 aaKnown RBP14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 TPX2Q9ULW0 747 aaKnown RBP14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 MFHAS1Q9Y4C4 1052 aa14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 EPN1Q9Y6I3 576 aaPredicted RBP14.19□□□□□ -0.14
PCDHGC3-208ENST00000622836 LAMA1P25391 3075 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 A0A1W2PPC4 97 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 LRRD1A4D1F6 860 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 ARHGAP33O14559 1287 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 SLC30A4O14863 429 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 PCDH8O95206 1070 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 KCNA4P22459 653 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 MAT2AP31153 395 aaKnown RBP14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 LIMK1P53667 647 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 PPP2CBP62714 309 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 PPP2CAP67775 309 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 IL10RBQ08334 325 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 DPYSL3Q14195 570 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 CYTH1Q15438 398 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 ANKRD20A8PQ5CZ79 823 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 CFAP58Q5T655 872 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 PIP5KL1Q5T9C9 394 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 GDPD4Q6W3E5 623 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 ARHGAP36Q6ZRI8 547 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 PRPF39Q86UA1 669 aaKnown RBP14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 PAF1Q8N7H5 531 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 NSMCE1Q8WV22 266 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 TSC1Q92574 1164 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 ZNF670Q9BS34 389 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 HDAC8Q9BY41 377 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 PREBQ9HCU5 417 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 AASDHPPTQ9NRN7 309 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 DLL3Q9NYJ7 618 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 LHX3Q9UBR4 397 aa14.18□□□□□ -0.14
PCDHGC3-208ENST00000622836 RNF103O00237 685 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 NEMP1O14524 444 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 RNGTTO60942 597 aaKnown RBP14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 KRT1P04264 644 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 ADRB3P13945 408 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 COMTP21964 271 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 XPAP23025 273 aaPredicted RBP14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 IL4RP24394 825 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 CSNK1EP49674 416 aaKnown RBP14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 ARSEP51690 589 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 C21orf59P57076 290 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 GRIK2Q13002 908 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 ZNF235Q14590 738 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 RFTN1Q14699 578 aaPredicted RBP14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 ZNF805Q5CZA5 627 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 TMCO4Q5TGY1 634 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 PARS2Q7L3T8 475 aaKnown RBP14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 DGLUCYQ7Z3D6 616 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 TP53INP2Q8IXH6 220 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 RHOT1Q8IXI2 618 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 BBS5Q8N3I7 341 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 MINDY1Q8N5J2 469 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 FAM131CQ96AQ9 280 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 SERAC1Q96JX3 654 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 KLHL32Q96NJ5 620 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 ZDHHC5Q9C0B5 715 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 TM9SF3Q9HD45 589 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 TFR2Q9UP52 801 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 HYOU1Q9Y4L1 999 aa14.17□□□□□ -0.14
PCDHGC3-208ENST00000622836 A0A1B0GVT2 93 aa14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 DCDC2BA2VCK2 349 aa14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 C16orf96A6NNT2 1141 aa14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 CDX4O14627 284 aaPredicted RBP14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 FECHP22830 423 aa14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 KDELR1P24390 212 aa14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 RENBPP51606 427 aa14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 TAS2R38P59533 333 aa14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 LBRQ14739 615 aaKnown RBP14.16□□□□□ -0.14
PCDHGC3-208ENST00000622836 GRM3Q14832 879 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms