RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 USP30Q70CQ3 517 aa14.52□□□□□ -0.08
CBWD3-217ENST00000621474 B4GALNT4Q76KP1 1039 aa14.52□□□□□ -0.08
CBWD3-217ENST00000621474 TEX26Q8N6G2 289 aa14.52□□□□□ -0.08
CBWD3-217ENST00000621474 UBL4BQ8N7F7 174 aa14.52□□□□□ -0.08
CBWD3-217ENST00000621474 TRIM58Q8NG06 486 aa14.52□□□□□ -0.08
CBWD3-217ENST00000621474 FATE1Q969F0 183 aa14.52□□□□□ -0.08
CBWD3-217ENST00000621474 ARRDC3Q96B67 414 aa14.52□□□□□ -0.08
CBWD3-217ENST00000621474 TOE1Q96GM8 510 aaKnown RBP14.52□□□□□ -0.08
CBWD3-217ENST00000621474 SPACA7Q96KW9 195 aa14.52□□□□□ -0.08
CBWD3-217ENST00000621474 CCDC114Q96M63 670 aa14.52□□□□□ -0.08
CBWD3-217ENST00000621474 GDAP1L1Q96MZ0 367 aa14.52□□□□□ -0.08
CBWD3-217ENST00000621474 TLR10Q9BXR5 811 aa14.52□□□□□ -0.08
CBWD3-217ENST00000621474 NEUROG2Q9H2A3 272 aa14.52□□□□□ -0.08
CBWD3-217ENST00000621474 ZDHHC6Q9H6R6 413 aa14.52□□□□□ -0.08
CBWD3-217ENST00000621474 TRMT1Q9NXH9 659 aaKnown RBP14.52□□□□□ -0.08
CBWD3-217ENST00000621474 FBXL12Q9NXK8 326 aa14.52□□□□□ -0.08
CBWD3-217ENST00000621474 EVLQ9UI08 416 aaPredicted RBP14.52□□□□□ -0.08
CBWD3-217ENST00000621474 RIF1Q5UIP0 2472 aaKnown RBP14.52□□□□□ -0.08
CBWD3-217ENST00000621474 EP300Q09472 2414 aaPredicted RBP14.52□□□□□ -0.08
CBWD3-217ENST00000621474 PI4KAP42356 2102 aa14.52□□□□□ -0.09
CBWD3-217ENST00000621474 MATN3O15232 486 aa14.52□□□□□ -0.09
CBWD3-217ENST00000621474 MX2P20592 715 aa14.52□□□□□ -0.09
CBWD3-217ENST00000621474 RECQLP46063 649 aaPredicted RBP14.52□□□□□ -0.09
CBWD3-217ENST00000621474 KLF1Q13351 362 aaPredicted RBP14.52□□□□□ -0.09
CBWD3-217ENST00000621474 HNRNPDQ14103 355 aaKnown RBP14.52□□□□□ -0.09
CBWD3-217ENST00000621474 TTC31Q49AM3 519 aaPredicted RBP14.52□□□□□ -0.09
CBWD3-217ENST00000621474 AGBL4Q5VU57 503 aa14.52□□□□□ -0.09
CBWD3-217ENST00000621474 PRR23BQ6ZRT6 265 aa14.52□□□□□ -0.09
CBWD3-217ENST00000621474 DSG4Q86SJ6 1040 aa14.52□□□□□ -0.09
CBWD3-217ENST00000621474 FAM124AQ86V42 546 aa14.52□□□□□ -0.09
CBWD3-217ENST00000621474 HAUS1Q96CS2 278 aa14.52□□□□□ -0.09
CBWD3-217ENST00000621474 ALS2CR12Q96Q35 445 aa14.52□□□□□ -0.09
CBWD3-217ENST00000621474 MGME1Q9BQP7 344 aa14.52□□□□□ -0.09
CBWD3-217ENST00000621474 CINPQ9BW66 212 aaPredicted RBP14.52□□□□□ -0.09
CBWD3-217ENST00000621474 SMG5Q9UPR3 1016 aaKnown RBP14.52□□□□□ -0.09
CBWD3-217ENST00000621474 FARP1Q9Y4F1 1045 aaPredicted RBP14.52□□□□□ -0.09
CBWD3-217ENST00000621474 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.52□□□□□ -0.09
CBWD3-217ENST00000621474 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.51□□□□□ -0.09
CBWD3-217ENST00000621474 TTC24A2A3L6 582 aaPredicted RBP14.51□□□□□ -0.09
CBWD3-217ENST00000621474 C1QTNF3-AMACRE9PGA6 284 aa14.51□□□□□ -0.09
CBWD3-217ENST00000621474 APOC4-APOC2K7ER74 178 aa14.51□□□□□ -0.09
CBWD3-217ENST00000621474 KPNA3O00505 521 aaPredicted RBP14.51□□□□□ -0.09
CBWD3-217ENST00000621474 KRIT1O00522 736 aa14.51□□□□□ -0.09
CBWD3-217ENST00000621474 RNASEH2AO75792 299 aaKnown RBP14.51□□□□□ -0.09
CBWD3-217ENST00000621474 POP4O95707 220 aaKnown RBP14.51□□□□□ -0.09
CBWD3-217ENST00000621474 IGSF6O95976 241 aa14.51□□□□□ -0.09
CBWD3-217ENST00000621474 APOC2P02655 101 aa14.51□□□□□ -0.09
CBWD3-217ENST00000621474 PRNPP04156 253 aa14.51□□□□□ -0.09
CBWD3-217ENST00000621474 PTGER3P43115 390 aa14.51□□□□□ -0.09
CBWD3-217ENST00000621474 CSNK1DP48730 415 aa14.51□□□□□ -0.09
CBWD3-217ENST00000621474 NR2C2P49116 596 aa14.51□□□□□ -0.09
CBWD3-217ENST00000621474 MAXP61244 160 aa14.51□□□□□ -0.09
CBWD3-217ENST00000621474 NSUN2Q08J23 767 aaKnown RBP eCLIP14.51□□□□□ -0.09
CBWD3-217ENST00000621474 CNTN1Q12860 1018 aa14.51□□□□□ -0.09
CBWD3-217ENST00000621474 ZBTB17Q13105 803 aa14.51□□□□□ -0.09
CBWD3-217ENST00000621474 IHHQ14623 411 aa14.51□□□□□ -0.09
CBWD3-217ENST00000621474 PIP5KL1Q5T9C9 394 aa14.51□□□□□ -0.09
CBWD3-217ENST00000621474 SLC41A1Q8IVJ1 513 aa14.51□□□□□ -0.09
CBWD3-217ENST00000621474 CCDC13Q8IYE1 715 aa14.51□□□□□ -0.09
CBWD3-217ENST00000621474 TMEFF1Q8IYR6 380 aa14.51□□□□□ -0.09
CBWD3-217ENST00000621474 HDDC3Q8N4P3 179 aa14.51□□□□□ -0.09
CBWD3-217ENST00000621474 CPEB1Q9BZB8 566 aaKnown RBP14.51□□□□□ -0.09
CBWD3-217ENST00000621474 SEPT3Q9UH03 358 aa14.51□□□□□ -0.09
CBWD3-217ENST00000621474 FZD4Q9ULV1 537 aa14.51□□□□□ -0.09
CBWD3-217ENST00000621474 ZFHX2Q9C0A1 2572 aaPredicted RBP14.51□□□□□ -0.09
CBWD3-217ENST00000621474 FAM186AA6NE01 2351 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 TCRBV7S2A1N4TA0A589 114 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 KCNK1O00180 336 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 ZSCAN12O43309 604 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 PIGNO95427 931 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 CCNB1P14635 433 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 MMP13P45452 471 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 ADPRHP54922 357 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 TAS2R38P59533 333 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 RPL6Q02878 288 aaKnown RBP14.5□□□□□ -0.09
CBWD3-217ENST00000621474 ZNF33AQ06730 810 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 BYSLQ13895 437 aaKnown RBP14.5□□□□□ -0.09
CBWD3-217ENST00000621474 PDK1Q15118 436 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 PRKD1Q15139 912 aaPredicted RBP14.5□□□□□ -0.09
CBWD3-217ENST00000621474 MARC1Q5VT66 337 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 FAM46CQ5VWP2 391 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 ALG1LQ6GMV1 187 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 TIGD7Q6NT04 549 aaPredicted RBP14.5□□□□□ -0.09
CBWD3-217ENST00000621474 CEP68Q76N32 757 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 ASCL5Q7RTU5 278 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 RYBPQ8N488 228 aaPredicted RBP14.5□□□□□ -0.09
CBWD3-217ENST00000621474 DEFB119Q8N690 84 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 CCNYQ8ND76 341 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 P3H4Q92791 437 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 NKD2Q969F2 451 aaPredicted RBP14.5□□□□□ -0.09
CBWD3-217ENST00000621474 LRIG1Q96JA1 1093 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 OMDQ99983 421 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 BTBD1Q9H0C5 482 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 SEMA4AQ9H3S1 761 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 LRRK1Q38SD2 2015 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 TRPM6Q9BX84 2022 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 PLXNA2O75051 1894 aa14.5□□□□□ -0.09
CBWD3-217ENST00000621474 PRR23AA6NEV1 266 aa14.49□□□□□ -0.09
CBWD3-217ENST00000621474 SPINT1O43278 529 aa14.49□□□□□ -0.09
CBWD3-217ENST00000621474 LMNAP02545 664 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms