RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 AP1B1Q10567 949 aa18.85■□□□□ 0.61
CIRBP-245ENST00000621399 HNRNPDQ14103 355 aaKnown RBP18.85■□□□□ 0.61
CIRBP-245ENST00000621399 ZNF569Q5MCW4 686 aa18.85■□□□□ 0.61
CIRBP-245ENST00000621399 DCAF12L1Q5VU92 463 aa18.85■□□□□ 0.61
CIRBP-245ENST00000621399 USP30Q70CQ3 517 aa18.85■□□□□ 0.61
CIRBP-245ENST00000621399 HDDC3Q8N4P3 179 aa18.85■□□□□ 0.61
CIRBP-245ENST00000621399 FATE1Q969F0 183 aa18.85■□□□□ 0.61
CIRBP-245ENST00000621399 LRIG1Q96JA1 1093 aa18.85■□□□□ 0.61
CIRBP-245ENST00000621399 OLFM3Q96PB7 478 aa18.85■□□□□ 0.61
CIRBP-245ENST00000621399 BRD8Q9H0E9 1235 aa18.85■□□□□ 0.61
CIRBP-245ENST00000621399 EVLQ9UI08 416 aaPredicted RBP18.85■□□□□ 0.61
CIRBP-245ENST00000621399 MBD1Q9UIS9 605 aaPredicted RBP18.85■□□□□ 0.61
CIRBP-245ENST00000621399 WASF2Q9Y6W5 498 aa18.85■□□□□ 0.61
CIRBP-245ENST00000621399 NUP205Q92621 2012 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 A0A1W2PP55 124 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 USP27XA6NNY8 438 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 APOC4-APOC2K7ER74 178 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 KCNK3O14649 394 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 MUSKO15146 869 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 NEBLO76041 1014 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 IGLV3-19P01714 112 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 APOC2P02655 101 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 CCNB1P14635 433 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 BCKDHBP21953 392 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 HSPA9P38646 679 aaKnown RBP18.84■□□□□ 0.61
CIRBP-245ENST00000621399 RGRP47804 291 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 METAP1P53582 386 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 NHLH1Q02575 133 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 NSUN2Q08J23 767 aaKnown RBP eCLIP18.84■□□□□ 0.61
CIRBP-245ENST00000621399 SEL1L2Q5TEA6 688 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 SLC36A4Q6YBV0 504 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 ALYREFQ86V81 257 aaKnown RBP18.84■□□□□ 0.61
CIRBP-245ENST00000621399 KBTBD6Q86V97 674 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 AADATQ8N5Z0 425 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 MAML1Q92585 1016 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 TOE1Q96GM8 510 aaKnown RBP18.84■□□□□ 0.61
CIRBP-245ENST00000621399 TLR10Q9BXR5 811 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 EPC1Q9H2F5 836 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 SEMA4AQ9H3S1 761 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 DYRK4Q9NR20 520 aa18.84■□□□□ 0.61
CIRBP-245ENST00000621399 KCNK1O00180 336 aa18.83■□□□□ 0.6
CIRBP-245ENST00000621399 RNF103O00237 685 aa18.83■□□□□ 0.6
CIRBP-245ENST00000621399 INSIG1O15503 277 aa18.83■□□□□ 0.6
CIRBP-245ENST00000621399 NDUFS2O75306 463 aa18.83■□□□□ 0.6
CIRBP-245ENST00000621399 MSNP26038 577 aaKnown RBP18.83■□□□□ 0.6
CIRBP-245ENST00000621399 CSNK1DP48730 415 aa18.83■□□□□ 0.6
CIRBP-245ENST00000621399 SCNN1BP51168 640 aa18.83■□□□□ 0.6
CIRBP-245ENST00000621399 ZNF33AQ06730 810 aa18.83■□□□□ 0.6
CIRBP-245ENST00000621399 GDPD4Q6W3E5 623 aa18.83■□□□□ 0.6
CIRBP-245ENST00000621399 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.83■□□□□ 0.6
CIRBP-245ENST00000621399 B4GALNT4Q76KP1 1039 aa18.83■□□□□ 0.6
CIRBP-245ENST00000621399 SRLQ86TD4 932 aa18.83■□□□□ 0.6
CIRBP-245ENST00000621399 ZC3H18Q86VM9 953 aaKnown RBP18.83■□□□□ 0.6
CIRBP-245ENST00000621399 TEX26Q8N6G2 289 aa18.83■□□□□ 0.6
CIRBP-245ENST00000621399 TFB1MQ8WVM0 346 aaKnown RBP18.83■□□□□ 0.6
CIRBP-245ENST00000621399 PPP1R16AQ96I34 528 aa18.83■□□□□ 0.6
CIRBP-245ENST00000621399 OSBPL1AQ9BXW6 950 aa18.83■□□□□ 0.6
CIRBP-245ENST00000621399 BTBD1Q9H0C5 482 aa18.83■□□□□ 0.6
CIRBP-245ENST00000621399 NEUROG2Q9H2A3 272 aa18.83■□□□□ 0.6
CIRBP-245ENST00000621399 NT5MQ9NPB1 228 aa18.83■□□□□ 0.6
CIRBP-245ENST00000621399 HAUS2Q9NVX0 235 aa18.83■□□□□ 0.6
CIRBP-245ENST00000621399 RBM22Q9NW64 420 aaKnown RBP eCLIP18.83■□□□□ 0.62e-8■■■□□ 16.7
CIRBP-245ENST00000621399 WSB2Q9NYS7 404 aaPredicted RBP18.83■□□□□ 0.6
CIRBP-245ENST00000621399 SERGEFQ9UGK8 458 aa18.83■□□□□ 0.6
CIRBP-245ENST00000621399 RAB23Q9ULC3 237 aa18.83■□□□□ 0.6
CIRBP-245ENST00000621399 JRKLQ9Y4A0 524 aa18.83■□□□□ 0.6
CIRBP-245ENST00000621399 NYNRINQ9P2P1 1898 aaKnown RBP18.83■□□□□ 0.6
CIRBP-245ENST00000621399 PLK4O00444 970 aa18.82■□□□□ 0.6
CIRBP-245ENST00000621399 RHOBTB1O94844 696 aa18.82■□□□□ 0.6
CIRBP-245ENST00000621399 JCHAINP01591 159 aa18.82■□□□□ 0.6
CIRBP-245ENST00000621399 UGT2B4P06133 528 aa18.82■□□□□ 0.6
CIRBP-245ENST00000621399 DRD3P35462 400 aa18.82■□□□□ 0.6
CIRBP-245ENST00000621399 RPL6Q02878 288 aaKnown RBP18.82■□□□□ 0.6
CIRBP-245ENST00000621399 ITKQ08881 620 aa18.82■□□□□ 0.6
CIRBP-245ENST00000621399 CNTN1Q12860 1018 aa18.82■□□□□ 0.6
CIRBP-245ENST00000621399 GRM3Q14832 879 aa18.82■□□□□ 0.6
CIRBP-245ENST00000621399 ELF2Q15723 593 aa18.82■□□□□ 0.6
CIRBP-245ENST00000621399 LPAL2Q16609 132 aa18.82■□□□□ 0.6
CIRBP-245ENST00000621399 PLK5Q496M5 336 aa18.82■□□□□ 0.6
CIRBP-245ENST00000621399 LPCAT2Q7L5N7 544 aa18.82■□□□□ 0.6
CIRBP-245ENST00000621399 SLC35F6Q8N357 371 aa18.82■□□□□ 0.6
CIRBP-245ENST00000621399 PGBD5Q8N414 524 aa18.82■□□□□ 0.6
CIRBP-245ENST00000621399 ACTL9Q8TC94 416 aa18.82■□□□□ 0.6
CIRBP-245ENST00000621399 ARRDC3Q96B67 414 aa18.82■□□□□ 0.6
CIRBP-245ENST00000621399 ZC3H10Q96K80 434 aaKnown RBP18.82■□□□□ 0.6
CIRBP-245ENST00000621399 GPR174Q9BXC1 333 aa18.82■□□□□ 0.6
CIRBP-245ENST00000621399 CPEB1Q9BZB8 566 aaKnown RBP18.82■□□□□ 0.6
CIRBP-245ENST00000621399 DUSP15Q9H1R2 295 aaPredicted RBP18.82■□□□□ 0.6
CIRBP-245ENST00000621399 CARD9Q9H257 536 aa18.82■□□□□ 0.6
CIRBP-245ENST00000621399 SGK2Q9HBY8 427 aa18.82■□□□□ 0.6
CIRBP-245ENST00000621399 SEPT10Q9P0V9 454 aa18.82■□□□□ 0.6
CIRBP-245ENST00000621399 FZD4Q9ULV1 537 aa18.82■□□□□ 0.6
CIRBP-245ENST00000621399 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.81■□□□□ 0.6
CIRBP-245ENST00000621399 TTC24A2A3L6 582 aaPredicted RBP18.81■□□□□ 0.6
CIRBP-245ENST00000621399 ENC1O14682 589 aa18.81■□□□□ 0.6
CIRBP-245ENST00000621399 GJB3O75712 270 aa18.81■□□□□ 0.6
CIRBP-245ENST00000621399 ITGB7P26010 798 aa18.81■□□□□ 0.6
CIRBP-245ENST00000621399 ACSL1P33121 698 aa18.81■□□□□ 0.6
CIRBP-245ENST00000621399 MAPK8P45983 427 aa18.81■□□□□ 0.6
CIRBP-245ENST00000621399 MAXP61244 160 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms