RNA–Protein interactions for RNA: ENST00000619142.4

GTF2IRD2B-208, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD2B, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-208ENST00000619142 NEK3P51956 506 aa20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 TEDDM1Q5T9Z0 273 aa20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 GRTP1Q5TC63 336 aa20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 RNF219Q5W0B1 726 aaPredicted RBP20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 LVRNQ6Q4G3 990 aa20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 HTR3DQ70Z44 454 aa20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 TMA16Q96EY4 203 aaKnown RBP20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 TGS1Q96RS0 853 aaKnown RBP20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 SEMA3CQ99985 751 aa20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 NSRP1Q9H0G5 558 aaKnown RBP20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 C20orf96Q9NUD7 363 aaPredicted RBP20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 EBAG9O00559 213 aa20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 MUSKO15146 869 aa20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 ADRA1DP25100 572 aa20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 CHRNA4P43681 627 aa20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 NUMBP49757 651 aa20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 IHHQ14623 411 aa20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 HSP90AA5PQ58FG0 334 aa20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 PDPK2PQ6A1A2 396 aa20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 ZNF778Q96MU6 729 aa20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 PSKH2Q96QS6 385 aa20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 MGME1Q9BQP7 344 aa20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 HTATIP2Q9BUP3 242 aa20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 MUC3BQ9H195 1237 aa20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 MKS1Q9NXB0 559 aa20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 PRKAG3Q9UGI9 489 aa20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 SH3BP1Q9Y3L3 701 aa20.55■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 H0Y626 953 aa20.54■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 COPEO14579 308 aa20.54■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 SCAMP3O14828 347 aaKnown RBP20.54■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 FGF19O95750 216 aa20.54■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 GJA1P17302 382 aa20.54■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 GLDCP23378 1020 aa20.54■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 SERPINH1P50454 418 aaKnown RBP20.54■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 HNRNPH2P55795 449 aaKnown RBP20.54■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 CARNMT1Q8N4J0 409 aa20.54■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 SLC25A41Q8N5S1 370 aa20.54■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 PRKD2Q9BZL6 878 aa20.54■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 CFAP97Q9P2B7 532 aa20.54■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 LOC285095A0A1B0GVY8 99 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 TTC24A2A3L6 582 aaPredicted RBP20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 NRG2O14511 850 aaPredicted RBP20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 LUC7L3O95232 432 aaKnown RBP20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 ITGA2BP08514 1039 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 EPHA5P54756 1037 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 SMAD1Q15797 465 aaKnown RBP20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 SLC14A2Q15849 920 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 STXBP5Q5T5C0 1151 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 GKAP1Q5VSY0 366 aaPredicted RBP20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 SPRED2Q7Z698 418 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 RANBP9Q96S59 729 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 CINPQ9BW66 212 aaPredicted RBP20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 SLC46A2Q9BY10 475 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 MAN1C1Q9NR34 630 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 NSMCE4AQ9NXX6 385 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 SLC17A7Q9P2U7 560 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 GRID1Q9ULK0 1009 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 DOCK6Q96HP0 2047 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 CBX4O00257 560 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 GRM6O15303 877 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 TAC1P20366 129 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 FOXN2P32314 431 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 SPRP35270 261 aaPredicted RBP20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 CAMK1Q14012 370 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 PDK4Q16654 411 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 RGS9BPQ6ZS82 235 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 CPXM2Q8N436 756 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 ACMSDQ8TDX5 336 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 SRPK1Q96SB4 655 aaKnown RBP20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 AGAP2Q99490 1192 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 RBBP8Q99708 897 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 IQCGQ9H095 443 aaKnown RBP20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 HCFC1R1Q9NWW0 138 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 ACTL7AQ9Y615 435 aa20.53■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 HELZP42694 1942 aaKnown RBP20.52■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 HEATR9A2RTY3 570 aa20.52■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 RFPL2O75678 378 aa20.52■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 ARHGEF15O94989 841 aa20.52■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 EPOP01588 193 aa20.52■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 SERPINF2P08697 491 aa20.52■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 MYOGP15173 224 aa20.52■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 PTPN2P17706 415 aa20.52■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 DDX6P26196 483 aaKnown RBP eCLIP20.52■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 HOXA9P31269 272 aa20.52■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 IRS1P35568 1242 aa20.52■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 CCR2P41597 374 aa20.52■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 STRA8Q7Z7C7 330 aa20.52■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 FEM1CQ96JP0 617 aa20.52■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 IARS2Q9NSE4 1012 aaKnown RBP20.52■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 TREX1Q9NSU2 369 aa20.52■□□□□ 0.88
GTF2IRD2B-208ENST00000619142 CCDC78A2IDD5 438 aa20.51■□□□□ 0.87
GTF2IRD2B-208ENST00000619142 ALADP13716 330 aa20.51■□□□□ 0.87
GTF2IRD2B-208ENST00000619142 PAMP19021 973 aa20.51■□□□□ 0.87
GTF2IRD2B-208ENST00000619142 ETV4P43268 484 aa20.51■□□□□ 0.87
GTF2IRD2B-208ENST00000619142 CSE1LP55060 971 aaKnown RBP20.51■□□□□ 0.87
GTF2IRD2B-208ENST00000619142 CDK18Q07002 472 aa20.51■□□□□ 0.87
GTF2IRD2B-208ENST00000619142 MSLNQ13421 630 aaPredicted RBP20.51■□□□□ 0.87
GTF2IRD2B-208ENST00000619142 FSCBQ5H9T9 825 aa20.51■□□□□ 0.87
GTF2IRD2B-208ENST00000619142 SIRPB2Q5JXA9 342 aa20.51■□□□□ 0.87
GTF2IRD2B-208ENST00000619142 ESRP1Q6NXG1 681 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms