RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 M0QX08 132 aa12.41□□□□□ -0.42
MATR3-227ENST00000618441 DYRK3O43781 588 aa12.41□□□□□ -0.42
MATR3-227ENST00000618441 PTPN2P17706 415 aa12.41□□□□□ -0.42
MATR3-227ENST00000618441 SESN2P58004 480 aaPredicted RBP12.41□□□□□ -0.42
MATR3-227ENST00000618441 CLEC16AQ2KHT3 1053 aa12.41□□□□□ -0.42
MATR3-227ENST00000618441 KIAA0408Q6ZU52 694 aa12.41□□□□□ -0.42
MATR3-227ENST00000618441 NECAB2Q7Z6G3 386 aa12.41□□□□□ -0.42
MATR3-227ENST00000618441 KCTD6Q8NC69 237 aa12.41□□□□□ -0.42
MATR3-227ENST00000618441 CYP2W1Q8TAV3 490 aa12.41□□□□□ -0.42
MATR3-227ENST00000618441 SLITRK1Q96PX8 696 aa12.41□□□□□ -0.42
MATR3-227ENST00000618441 EMILIN2Q9BXX0 1053 aa12.41□□□□□ -0.42
MATR3-227ENST00000618441 LHPPQ9H008 270 aa12.41□□□□□ -0.42
MATR3-227ENST00000618441 MRPL47Q9HD33 250 aaKnown RBP12.41□□□□□ -0.42
MATR3-227ENST00000618441 C8orf4Q9NR00 106 aa12.41□□□□□ -0.42
MATR3-227ENST00000618441 SLC9A2Q9UBY0 812 aa12.41□□□□□ -0.42
MATR3-227ENST00000618441 POLLQ9UGP5 575 aa12.41□□□□□ -0.42
MATR3-227ENST00000618441 USP17L10C9JJH3 530 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 C9JVG2 144 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 VWA5AO00534 786 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 TPP1O14773 563 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 CSDE1O75534 798 aaKnown RBP12.4□□□□□ -0.42
MATR3-227ENST00000618441 CFHP08603 1231 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 OSBPP22059 807 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 GABRB3P28472 473 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 IL12AP29459 219 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 ACADSBP45954 432 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 DPYSQ14117 519 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 DESI1Q6ICB0 168 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 DNAJC24Q6P3W2 148 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 LDHDQ86WU2 507 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 CBWD2Q8IUF1 395 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 CLEC4FQ8N1N0 589 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 HCAR2Q8TDS4 363 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 SLC7A3Q8WY07 619 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 RMDN1Q96DB5 314 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 C8orf48Q96LL4 319 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 WDR83Q9BRX9 315 aaKnown RBP12.4□□□□□ -0.42
MATR3-227ENST00000618441 ZNF577Q9BSK1 485 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 EXD2Q9NVH0 621 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 GTSE1Q9NYZ3 720 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 OAZ3Q9UMX2 235 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 ECM29Q5VYK3 1845 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 POM121CA8CG34 1229 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 ALX3O95076 343 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 PCP11498 1178 aaKnown RBP12.4□□□□□ -0.42
MATR3-227ENST00000618441 IL7RP16871 459 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 IL10P22301 178 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 PSMB9P28065 219 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 POLD2P49005 469 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 HK2P52789 917 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 VBP1P61758 197 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 CMC1Q7Z7K0 106 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 CAMK1DQ8IU85 385 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 MICU2Q8IYU8 434 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 ZNF420Q8TAQ5 688 aaPredicted RBP12.4□□□□□ -0.42
MATR3-227ENST00000618441 PIK3R3Q92569 461 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 ZNF597Q96LX8 424 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 TCF12Q99081 682 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 NELL2Q99435 816 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 RMND5AQ9H871 391 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 HSPBP1Q9NZL4 362 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 CDY2AQ9Y6F7 541 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 CDY1Q9Y6F8 540 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 HEATR9A2RTY3 570 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 KLF11O14901 512 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 RSL1D1O76021 490 aaKnown RBP12.4□□□□□ -0.42
MATR3-227ENST00000618441 ETV3P41162 512 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 SERPINB10P48595 397 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 BLVRAP53004 296 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 CYP4A22Q5TCH4 519 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 GALNT13Q8IUC8 556 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 LRRC20Q8TCA0 184 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 TRIM8Q9BZR9 551 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 C1orf112Q9NSG2 853 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 PCDHA1Q9Y5I3 950 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 SNCAIPQ9Y6H5 919 aa12.4□□□□□ -0.42
MATR3-227ENST00000618441 PRSS51A0A1B0GVH4 220 aa12.4□□□□□ -0.43
MATR3-227ENST00000618441 KCNN4O15554 427 aa12.4□□□□□ -0.43
MATR3-227ENST00000618441 ONECUT3O60422 494 aaPredicted RBP12.4□□□□□ -0.43
MATR3-227ENST00000618441 BCAS1O75363 584 aaPredicted RBP12.4□□□□□ -0.43
MATR3-227ENST00000618441 TP53P04637 393 aaPredicted RBP12.4□□□□□ -0.43
MATR3-227ENST00000618441 CHRNGP07510 517 aa12.4□□□□□ -0.43
MATR3-227ENST00000618441 TNNI1P19237 187 aa12.4□□□□□ -0.43
MATR3-227ENST00000618441 UQCRC1P31930 480 aa12.4□□□□□ -0.43
MATR3-227ENST00000618441 DPP6P42658 865 aa12.4□□□□□ -0.43
MATR3-227ENST00000618441 C1QBPQ07021 282 aaKnown RBP12.4□□□□□ -0.43
MATR3-227ENST00000618441 HERC3Q15034 1050 aa12.4□□□□□ -0.43
MATR3-227ENST00000618441 AGKQ53H12 422 aa12.4□□□□□ -0.43
MATR3-227ENST00000618441 PIGZQ86VD9 579 aa12.4□□□□□ -0.43
MATR3-227ENST00000618441 ZNF354CQ86Y25 554 aa12.4□□□□□ -0.43
MATR3-227ENST00000618441 SPPL2CQ8IUH8 684 aa12.4□□□□□ -0.43
MATR3-227ENST00000618441 NSUN6Q8TEA1 469 aaKnown RBP12.4□□□□□ -0.43
MATR3-227ENST00000618441 BIRC7Q96CA5 298 aa12.4□□□□□ -0.43
MATR3-227ENST00000618441 UQCC2Q9BRT2 126 aa12.4□□□□□ -0.43
MATR3-227ENST00000618441 MRPL40Q9NQ50 206 aaKnown RBP12.4□□□□□ -0.43
MATR3-227ENST00000618441 MRPS23Q9Y3D9 190 aaKnown RBP12.4□□□□□ -0.43
MATR3-227ENST00000618441 TOGARAM1Q9Y4F4 1720 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 FAM172BPA6NC97 362 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 ATP6V1G2-DDX39BF2Z307 99 aa12.39□□□□□ -0.43
MATR3-227ENST00000618441 TRIM38O00635 465 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms