RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 SHROOM3Q8TF72 1996 aa17.43■□□□□ 0.38
SBDS-205ENST00000617799 hCG_1818297A0A087WSY0 165 aa17.43■□□□□ 0.38
SBDS-205ENST00000617799 A0A1W2PP55 124 aa17.43■□□□□ 0.38
SBDS-205ENST00000617799 KCNK3O14649 394 aa17.43■□□□□ 0.38
SBDS-205ENST00000617799 CD6P30203 668 aa17.43■□□□□ 0.38
SBDS-205ENST00000617799 RAD51Q06609 339 aa17.43■□□□□ 0.38
SBDS-205ENST00000617799 TUBB2AQ13885 445 aa17.43■□□□□ 0.38
SBDS-205ENST00000617799 LBRQ14739 615 aaKnown RBP17.43■□□□□ 0.38
SBDS-205ENST00000617799 TIGD7Q6NT04 549 aaPredicted RBP17.43■□□□□ 0.38
SBDS-205ENST00000617799 NPNTQ6UXI9 565 aa17.43■□□□□ 0.38
SBDS-205ENST00000617799 NYAP1Q6ZVC0 841 aa17.43■□□□□ 0.38
SBDS-205ENST00000617799 LPCAT2Q7L5N7 544 aa17.43■□□□□ 0.38
SBDS-205ENST00000617799 HDDC3Q8N4P3 179 aa17.43■□□□□ 0.38
SBDS-205ENST00000617799 TOE1Q96GM8 510 aaKnown RBP17.43■□□□□ 0.38
SBDS-205ENST00000617799 FERMT1Q9BQL6 677 aa17.43■□□□□ 0.38
SBDS-205ENST00000617799 TUBB2BQ9BVA1 445 aa17.43■□□□□ 0.38
SBDS-205ENST00000617799 OSBPL8Q9BZF1 889 aa17.43■□□□□ 0.38
SBDS-205ENST00000617799 HOMER3Q9NSC5 361 aa17.43■□□□□ 0.38
SBDS-205ENST00000617799 LHX3Q9UBR4 397 aa17.43■□□□□ 0.38
SBDS-205ENST00000617799 MBD1Q9UIS9 605 aaPredicted RBP17.43■□□□□ 0.38
SBDS-205ENST00000617799 SARDHQ9UL12 918 aa17.43■□□□□ 0.38
SBDS-205ENST00000617799 PPM1HQ9ULR3 514 aa17.43■□□□□ 0.38
SBDS-205ENST00000617799 SNX12Q9UMY4 172 aa17.43■□□□□ 0.38
SBDS-205ENST00000617799 PPP1R12AO14974 1030 aaPredicted RBP17.42■□□□□ 0.38
SBDS-205ENST00000617799 LEFTY1O75610 366 aa17.42■□□□□ 0.38
SBDS-205ENST00000617799 RHOBTB1O94844 696 aa17.42■□□□□ 0.38
SBDS-205ENST00000617799 POP4O95707 220 aaKnown RBP17.42■□□□□ 0.38
SBDS-205ENST00000617799 CTSLP07711 333 aa17.42■□□□□ 0.38
SBDS-205ENST00000617799 CASQ1P31415 396 aa17.42■□□□□ 0.38
SBDS-205ENST00000617799 GKP32189 559 aa17.42■□□□□ 0.38
SBDS-205ENST00000617799 SLC10A7Q0GE19 358 aa17.42■□□□□ 0.38
SBDS-205ENST00000617799 SLC10A2Q12908 348 aaPredicted RBP17.42■□□□□ 0.38
SBDS-205ENST00000617799 ZNF211Q13398 564 aaPredicted RBP17.42■□□□□ 0.38
SBDS-205ENST00000617799 PDK1Q15118 436 aa17.42■□□□□ 0.38
SBDS-205ENST00000617799 MYLK3Q32MK0 819 aa17.42■□□□□ 0.38
SBDS-205ENST00000617799 MARC1Q5VT66 337 aa17.42■□□□□ 0.38
SBDS-205ENST00000617799 PAPD7Q5XG87 772 aaKnown RBP17.42■□□□□ 0.38
SBDS-205ENST00000617799 BBS12Q6ZW61 710 aa17.42■□□□□ 0.38
SBDS-205ENST00000617799 USP30Q70CQ3 517 aa17.42■□□□□ 0.38
SBDS-205ENST00000617799 PLPP6Q8IY26 295 aa17.42■□□□□ 0.38
SBDS-205ENST00000617799 DEFB119Q8N690 84 aa17.42■□□□□ 0.38
SBDS-205ENST00000617799 TSEN2Q8NCE0 465 aaKnown RBP17.42■□□□□ 0.38
SBDS-205ENST00000617799 TMIEQ8NEW7 156 aa17.42■□□□□ 0.38
SBDS-205ENST00000617799 LRRN4Q8WUT4 740 aa17.42■□□□□ 0.38
SBDS-205ENST00000617799 P3H4Q92791 437 aa17.42■□□□□ 0.38
SBDS-205ENST00000617799 HAUS1Q96CS2 278 aa17.42■□□□□ 0.38
SBDS-205ENST00000617799 PPP1R16AQ96I34 528 aa17.42■□□□□ 0.38
SBDS-205ENST00000617799 PHOX2BQ99453 314 aa17.42■□□□□ 0.38
SBDS-205ENST00000617799 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.42■□□□□ 0.38
SBDS-205ENST00000617799 SERGEFQ9UGK8 458 aa17.42■□□□□ 0.38
SBDS-205ENST00000617799 EVLQ9UI08 416 aaPredicted RBP17.42■□□□□ 0.38
SBDS-205ENST00000617799 TTC7AQ9ULT0 858 aaPredicted RBP17.42■□□□□ 0.38
SBDS-205ENST00000617799 TTLL3Q9Y4R7 772 aa17.42■□□□□ 0.38
SBDS-205ENST00000617799 PLXND1Q9Y4D7 1925 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 APOC4-APOC2K7ER74 178 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 PLK4O00444 970 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 IGLV3-19P01714 112 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 LMNAP02545 664 aaKnown RBP17.41■□□□□ 0.38
SBDS-205ENST00000617799 APOC2P02655 101 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 PYGMP11217 842 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 MMP13P45452 471 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 DHPSP49366 369 aaPredicted RBP17.41■□□□□ 0.38
SBDS-205ENST00000617799 RENBPP51606 427 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 METAP1P53582 386 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 AP1B1Q10567 949 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 PLK5Q496M5 336 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.41■□□□□ 0.38
SBDS-205ENST00000617799 ARMCX6Q7L4S7 300 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 CCDC13Q8IYE1 715 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 TMEFF1Q8IYR6 380 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 AADATQ8N5Z0 425 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 PAF1Q8N7H5 531 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 FATE1Q969F0 183 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 HDAC11Q96DB2 347 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 LGMNQ99538 433 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 GPR174Q9BXC1 333 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 BTBD1Q9H0C5 482 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 SAE1Q9UBE0 346 aaPredicted RBP17.41■□□□□ 0.38
SBDS-205ENST00000617799 FZD4Q9ULV1 537 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 SAR1BQ9Y6B6 198 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 WASF2Q9Y6W5 498 aa17.41■□□□□ 0.38
SBDS-205ENST00000617799 FAM47DPA6NHR8 397 aa17.4■□□□□ 0.38
SBDS-205ENST00000617799 MTSS1O43312 755 aa17.4■□□□□ 0.38
SBDS-205ENST00000617799 SEMA4FO95754 770 aa17.4■□□□□ 0.38
SBDS-205ENST00000617799 UGT2B4P06133 528 aa17.4■□□□□ 0.38
SBDS-205ENST00000617799 PECAM1P16284 738 aaPredicted RBP17.4■□□□□ 0.38
SBDS-205ENST00000617799 CCNCP24863 283 aa17.4■□□□□ 0.38
SBDS-205ENST00000617799 ADCY2Q08462 1091 aa17.4■□□□□ 0.38
SBDS-205ENST00000617799 ITKQ08881 620 aa17.4■□□□□ 0.38
SBDS-205ENST00000617799 CCDC15Q0P6D6 951 aa17.4■□□□□ 0.38
SBDS-205ENST00000617799 CNTN1Q12860 1018 aa17.4■□□□□ 0.38
SBDS-205ENST00000617799 XRCC4Q13426 336 aa17.4■□□□□ 0.38
SBDS-205ENST00000617799 CFAP58Q5T655 872 aa17.4■□□□□ 0.38
SBDS-205ENST00000617799 LAIR1Q6GTX8 287 aa17.4■□□□□ 0.38
SBDS-205ENST00000617799 AADACL2Q6P093 401 aa17.4■□□□□ 0.38
SBDS-205ENST00000617799 LRIG1Q96JA1 1093 aa17.4■□□□□ 0.38
SBDS-205ENST00000617799 TSGA13Q96PP4 275 aa17.4■□□□□ 0.38
SBDS-205ENST00000617799 PSKH2Q96QS6 385 aa17.4■□□□□ 0.38
SBDS-205ENST00000617799 HINFPQ9BQA5 517 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms