RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 CCDC172P0C7W6 258 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 COMTP21964 271 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 CNR2P34972 360 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 OXCT1P55809 520 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 BNIP3Q12983 259 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 HSF5Q4G112 596 aaPredicted RBP5.79□□□□□ -1.48
CPNE3-208ENST00000614678 SYT12Q8IV01 421 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 MINDY1Q8N5J2 469 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 DEFB124Q8NES8 71 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 EXOC4Q96A65 974 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 SPACA7Q96KW9 195 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 C2orf49Q9BVC5 232 aaPredicted RBP5.79□□□□□ -1.48
CPNE3-208ENST00000614678 IRF2BPLQ9H1B7 796 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 DLL3Q9NYJ7 618 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 PCDHGC4Q9Y5F7 938 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 ANKRD11Q6UB99 2663 aaPredicted RBP5.79□□□□□ -1.48
CPNE3-208ENST00000614678 KCNK1O00180 336 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 DAPK3O43293 454 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 KDELR3O43731 214 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 PDHA1P08559 390 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 H2AFZP0C0S5 128 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 PTMSP20962 102 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 OLIG2Q13516 323 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 DPYSL2Q16555 572 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 KAZNQ674X7 775 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 PSAPL1Q6NUJ1 521 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 H2AFVQ71UI9 128 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 SPATS2Q86XZ4 545 aaKnown RBP5.79□□□□□ -1.48
CPNE3-208ENST00000614678 CCDC117Q8IWD4 279 aaPredicted RBP5.79□□□□□ -1.48
CPNE3-208ENST00000614678 NAT14Q8WUY8 206 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 PTCD2Q8WV60 388 aaKnown RBP5.79□□□□□ -1.48
CPNE3-208ENST00000614678 IRX2Q9BZI1 471 aaPredicted RBP5.79□□□□□ -1.48
CPNE3-208ENST00000614678 KLF15Q9UIH9 416 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 CBFA2T2O43439 604 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 SH3BP5O60239 455 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 MAFKO60675 156 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 PROSCO94903 275 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 PECAM1P16284 738 aaPredicted RBP5.79□□□□□ -1.48
CPNE3-208ENST00000614678 SHBQ15464 509 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 PREPLQ4J6C6 727 aaPredicted RBP5.79□□□□□ -1.48
CPNE3-208ENST00000614678 TTC39BQ5VTQ0 682 aaPredicted RBP5.79□□□□□ -1.48
CPNE3-208ENST00000614678 AFMIDQ63HM1 303 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 MFSD7Q6UXD7 560 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 UMODL1-AS1Q8N2C9 162 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 C12orf50Q8NA57 414 aaPredicted RBP5.79□□□□□ -1.48
CPNE3-208ENST00000614678 FNIP1Q8TF40 1166 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 HEMGNQ9BXL5 484 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 TCEAL2Q9H3H9 227 aaPredicted RBP5.79□□□□□ -1.48
CPNE3-208ENST00000614678 MBNL1Q9NR56 388 aaKnown RBP5.79□□□□□ -1.48
CPNE3-208ENST00000614678 IL36AQ9UHA7 158 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 TTLL3Q9Y4R7 772 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 PCDHA13Q9Y5I0 950 aa5.79□□□□□ -1.48
CPNE3-208ENST00000614678 APC2O95996 2303 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 A0A1W2PQU0 124 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 IGLON5A6NGN9 336 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 C16orf96A6NNT2 1141 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 C10orf142B7Z368 130 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 MMP20O60882 483 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 ZNF217O75362 1048 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 NEBLO76041 1014 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 RHOBTB1O94844 696 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 IGLV3-19P01714 112 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 NRG1Q02297 640 aaPredicted RBP5.78□□□□□ -1.48
CPNE3-208ENST00000614678 CCDC157Q569K6 752 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 CARD16Q5EG05 197 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 SLC22A18ASQ8N1D0 253 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 PLD5Q8N7P1 536 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 CTNNBL1Q8WYA6 563 aaPredicted RBP5.78□□□□□ -1.48
CPNE3-208ENST00000614678 EPAS1Q99814 870 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 SUN2Q9UH99 717 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 IPO11Q9UI26 975 aaKnown RBP5.78□□□□□ -1.48
CPNE3-208ENST00000614678 DAAM1Q9Y4D1 1078 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 SCINQ9Y6U3 715 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 RELNP78509 3460 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 SSU72P8A0A1W2PR75 194 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 TCRBV7S2A1N4TA0A589 114 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 MACROD2A1Z1Q3 448 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 AGRPO00253 132 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 KHNYNO15037 678 aaKnown RBP5.78□□□□□ -1.48
CPNE3-208ENST00000614678 BCAT2O15382 392 aaPredicted RBP5.78□□□□□ -1.48
CPNE3-208ENST00000614678 PALMO75781 387 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 PCDH8O95206 1070 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 ASLP04424 464 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 TMEM253P0C7T8 217 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 SCNN1BP51168 640 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 RHOAP61586 193 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 ZNF211Q13398 564 aaPredicted RBP5.78□□□□□ -1.48
CPNE3-208ENST00000614678 NOMO1Q15155 1222 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 HLA-BQ31612 363 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 ANKRD20A8PQ5CZ79 823 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 ZFYVE27Q5T4F4 411 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 OR2AP1Q8NGE2 309 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 DNASE2BQ8WZ79 361 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 OR8D1Q8WZ84 308 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 UCKL1Q9NWZ5 548 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 HEY1Q9Y5J3 304 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 ALG6Q9Y672 507 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 BZW2Q9Y6E2 419 aaKnown RBP5.78□□□□□ -1.48
CPNE3-208ENST00000614678 LRRD1A4D1F6 860 aa5.78□□□□□ -1.48
CPNE3-208ENST00000614678 K7ESM1 405 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms