RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 LRRN4Q8WUT4 740 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 FAM3CQ92520 227 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 ATP2A3Q93084 1043 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 ALG14Q96F25 216 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 LMLNQ96KR4 655 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 NELL2Q99435 816 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 FAM83CQ9BQN1 747 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 BBS2Q9BXC9 721 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 FAM126AQ9BYI3 521 aaPredicted RBP11.64□□□□□ -0.55
SLIRP-212ENST00000613856 SLC2A11Q9BYW1 496 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 TRIM31Q9BZY9 425 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 LINC00597Q9H2U6 94 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 BRD9Q9H8M2 597 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 ATP13A1Q9HD20 1204 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 ZDHHC18Q9NUE0 388 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 SHOC2Q9UQ13 582 aa11.64□□□□□ -0.55
SLIRP-212ENST00000613856 FARP1Q9Y4F1 1045 aaPredicted RBP11.64□□□□□ -0.55
SLIRP-212ENST00000613856 A0A0D9SEW6 157 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 NEDD8-MDP1E9PL57 170 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 KCNK1O00180 336 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 TP73O15350 636 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 CACNG3O60359 315 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 ADH5P11766 374 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 CCNB1P14635 433 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 TYRP14679 529 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 GDI1P31150 447 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 FDFT1P37268 417 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 CSKP41240 450 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 CARSP49589 748 aaKnown RBP11.63□□□□□ -0.55
SLIRP-212ENST00000613856 RENBPP51606 427 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 GAD2Q05329 585 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 LMAN2Q12907 356 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 SEMA5AQ13591 1074 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 RFTN1Q14699 578 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-212ENST00000613856 MORF4L2Q15014 288 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 DHCR24Q15392 516 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 TRADDQ15628 312 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 MAP9Q49MG5 647 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 FSCBQ5H9T9 825 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 RNASEH2BQ5TBB1 312 aaKnown RBP11.63□□□□□ -0.55
SLIRP-212ENST00000613856 RNF219Q5W0B1 726 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-212ENST00000613856 HIBCHQ6NVY1 386 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-212ENST00000613856 RHBDF2Q6PJF5 856 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 KLHDC8BQ8IXV7 354 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 NSMCE1Q8WV22 266 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 DNASE1L2Q92874 299 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 ART4Q93070 314 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 TEKT5Q96M29 485 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 PPP1R2P1Q96PQ5 205 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 FEM1AQ9BSK4 669 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 MUC3BQ9H195 1237 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 GBA3Q9H227 469 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 EIF2B3Q9NR50 452 aaKnown RBP11.63□□□□□ -0.55
SLIRP-212ENST00000613856 ARGLU1Q9NWB6 273 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-212ENST00000613856 SEPT10Q9P0V9 454 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 KIAA1522Q9P206 1035 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-212ENST00000613856 KLHL8Q9P2G9 620 aaPredicted RBP11.63□□□□□ -0.55
SLIRP-212ENST00000613856 FBXO10Q9UK96 956 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 TPX2Q9ULW0 747 aaKnown RBP11.63□□□□□ -0.55
SLIRP-212ENST00000613856 PIAS3Q9Y6X2 628 aa11.63□□□□□ -0.55
SLIRP-212ENST00000613856 ZFYVE26Q68DK2 2539 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 J3KR12 359 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 ARNTLO00327 626 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 CHADO15335 359 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 ERLIN1O75477 346 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 ZMPSTE24O75844 475 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 TOP3BO95985 862 aaKnown RBP11.62□□□□□ -0.55
SLIRP-212ENST00000613856 JCHAINP01591 159 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 MYBL2P10244 700 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 PSMC3P17980 439 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 SPINK2P20155 84 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 TPSB2P20231 275 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 MZF1P28698 734 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-212ENST00000613856 CXCL12P48061 93 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 ITGA8P53708 1063 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 GEMIN4P57678 1058 aaKnown RBP11.62□□□□□ -0.55
SLIRP-212ENST00000613856 HLTFQ14527 1009 aaKnown RBP eCLIP11.62□□□□□ -0.55
SLIRP-212ENST00000613856 DMC1Q14565 340 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 KCNJ11Q14654 390 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 TPSAB1Q15661 275 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 KCTD19Q17RG1 926 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-212ENST00000613856 PARP6Q2NL67 630 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 PLEKHG6Q3KR16 790 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 IL31Q6EBC2 164 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 PKN3Q6P5Z2 889 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 EMBQ6PCB8 327 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 TXNDC11Q6PKC3 985 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 KIAA0907Q7Z7F0 614 aaPredicted RBP11.62□□□□□ -0.55
SLIRP-212ENST00000613856 ZNF354CQ86Y25 554 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 PPIL6Q8IXY8 311 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 CNTD1Q8N815 330 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 NAT8LQ8N9F0 302 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 TTC8Q8TAM2 541 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 FBXO25Q8TCJ0 367 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 AENQ8WTP8 325 aaKnown RBP11.62□□□□□ -0.55
SLIRP-212ENST00000613856 HNRNPLLQ8WVV9 542 aaKnown RBP11.62□□□□□ -0.55
SLIRP-212ENST00000613856 IFT81Q8WYA0 676 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 CPT1BQ92523 772 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 ANKRD7Q92527 254 aa11.62□□□□□ -0.55
SLIRP-212ENST00000613856 BHMTQ93088 406 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms