RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 PTGIRP43119 386 aa14.91□□□□□ -0.02
CD48-203ENST00000613788 NRLP54845 237 aa14.91□□□□□ -0.02
CD48-203ENST00000613788 MAXP61244 160 aa14.91□□□□□ -0.02
CD48-203ENST00000613788 FZD5Q13467 585 aa14.91□□□□□ -0.02
CD48-203ENST00000613788 PRPSAP1Q14558 356 aa14.91□□□□□ -0.02
CD48-203ENST00000613788 GRM3Q14832 879 aa14.91□□□□□ -0.02
CD48-203ENST00000613788 STARD3Q14849 445 aa14.91□□□□□ -0.02
CD48-203ENST00000613788 PARP6Q2NL67 630 aa14.91□□□□□ -0.02
CD48-203ENST00000613788 MYLK3Q32MK0 819 aa14.91□□□□□ -0.02
CD48-203ENST00000613788 ALG1LQ6GMV1 187 aa14.91□□□□□ -0.02
CD48-203ENST00000613788 SRLQ86TD4 932 aa14.91□□□□□ -0.02
CD48-203ENST00000613788 ZNF366Q8N895 744 aa14.91□□□□□ -0.02
CD48-203ENST00000613788 FLCNQ8NFG4 579 aa14.91□□□□□ -0.02
CD48-203ENST00000613788 OR2A12Q8NGT7 310 aa14.91□□□□□ -0.02
CD48-203ENST00000613788 CLDN23Q96B33 292 aa14.91□□□□□ -0.02
CD48-203ENST00000613788 ZNF419Q96HQ0 510 aaPredicted RBP14.91□□□□□ -0.02
CD48-203ENST00000613788 EXOC2Q96KP1 924 aa14.91□□□□□ -0.02
CD48-203ENST00000613788 FCRL5Q96RD9 977 aa14.91□□□□□ -0.02
CD48-203ENST00000613788 SEMA3CQ99985 751 aa14.91□□□□□ -0.02
CD48-203ENST00000613788 GBA3Q9H227 469 aa14.91□□□□□ -0.02
CD48-203ENST00000613788 SCUBE2Q9NQ36 999 aa14.91□□□□□ -0.02
CD48-203ENST00000613788 ALOX15BO15296 676 aa14.9□□□□□ -0.02
CD48-203ENST00000613788 SIN3BO75182 1162 aa14.9□□□□□ -0.02
CD48-203ENST00000613788 ZSCAN5DPP0CG00 497 aa14.9□□□□□ -0.02
CD48-203ENST00000613788 HOXB2P14652 356 aa14.9□□□□□ -0.02
CD48-203ENST00000613788 ETS1P14921 441 aa14.9□□□□□ -0.02
CD48-203ENST00000613788 NFKB1P19838 968 aa14.9□□□□□ -0.02
CD48-203ENST00000613788 CR2P20023 1033 aa14.9□□□□□ -0.02
CD48-203ENST00000613788 CD68P34810 354 aaPredicted RBP14.9□□□□□ -0.02
CD48-203ENST00000613788 RPL22P35268 128 aaKnown RBP14.9□□□□□ -0.02
CD48-203ENST00000613788 MAGEA9P43362 315 aa14.9□□□□□ -0.02
CD48-203ENST00000613788 RPS9P46781 194 aaKnown RBP14.9□□□□□ -0.02
CD48-203ENST00000613788 AP1S1P61966 158 aa14.9□□□□□ -0.02
CD48-203ENST00000613788 ATXN7L2Q5T6C5 722 aaPredicted RBP14.9□□□□□ -0.02
CD48-203ENST00000613788 C9orf64Q5T6V5 341 aa14.9□□□□□ -0.02
CD48-203ENST00000613788 CCDC70Q6NSX1 233 aa14.9□□□□□ -0.02
CD48-203ENST00000613788 DPY19L3Q6ZPD9 716 aa14.9□□□□□ -0.02
CD48-203ENST00000613788 LRIG1Q96JA1 1093 aa14.9□□□□□ -0.02
CD48-203ENST00000613788 HEPHQ9BQS7 1158 aa14.9□□□□□ -0.02
CD48-203ENST00000613788 PRSS16Q9NQE7 514 aa14.9□□□□□ -0.02
CD48-203ENST00000613788 MMP17Q9ULZ9 603 aa14.9□□□□□ -0.02
CD48-203ENST00000613788 SHROOM3Q8TF72 1996 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.89□□□□□ -0.03
CD48-203ENST00000613788 GOLGA6CA6NDK9 693 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 GOLGA6BA6NDN3 693 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 TMEM221A6NGB7 291 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 M0R296 226 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 TTI1O43156 1089 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 ADAM23O75077 832 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 ANXA9O76027 345 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 SERPINF2P08697 491 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 GOLGA6DP0CG33 693 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 FDFT1P37268 417 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 RGRP47804 291 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 CCNHP51946 323 aaPredicted RBP14.89□□□□□ -0.03
CD48-203ENST00000613788 TUBB4BP68371 445 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 DSC2Q02487 901 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 CAMK2GQ13555 558 aaPredicted RBP14.89□□□□□ -0.03
CD48-203ENST00000613788 PTK6Q13882 451 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 ELAVL3Q14576 367 aaKnown RBP14.89□□□□□ -0.03
CD48-203ENST00000613788 TRIP13Q15645 432 aaPredicted RBP14.89□□□□□ -0.03
CD48-203ENST00000613788 GLE1Q53GS7 698 aaKnown RBP14.89□□□□□ -0.03
CD48-203ENST00000613788 C8orf74Q6P047 294 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 NCEH1Q6PIU2 408 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 DSG4Q86SJ6 1040 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 PRUNE1Q86TP1 453 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 JAMLQ86YT9 394 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.89□□□□□ -0.03
CD48-203ENST00000613788 GLIS1Q8NBF1 620 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 ARRDC2Q8TBH0 407 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 OR8D1Q8WZ84 308 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 LRRC45Q96CN5 670 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 IMP4Q96G21 291 aaKnown RBP14.89□□□□□ -0.03
CD48-203ENST00000613788 TUBGCP5Q96RT8 1024 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 IER2Q9BTL4 223 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 CPEB1Q9BZB8 566 aaKnown RBP14.89□□□□□ -0.03
CD48-203ENST00000613788 MTG2Q9H4K7 406 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 FBRSQ9HAH7 460 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 NOD2Q9HC29 1040 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 VPS45Q9NRW7 570 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 GOLGA6AQ9NYA3 693 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 EVLQ9UI08 416 aaPredicted RBP14.89□□□□□ -0.03
CD48-203ENST00000613788 AAR2Q9Y312 384 aaKnown RBP14.89□□□□□ -0.03
CD48-203ENST00000613788 NEU2Q9Y3R4 380 aa14.89□□□□□ -0.03
CD48-203ENST00000613788 PSMD3O43242 534 aa14.88□□□□□ -0.03
CD48-203ENST00000613788 RAD51CO43502 376 aa14.88□□□□□ -0.03
CD48-203ENST00000613788 RNASEH1O60930 286 aaKnown RBP14.88□□□□□ -0.03
CD48-203ENST00000613788 SLU7O95391 586 aaKnown RBP14.88□□□□□ -0.03
CD48-203ENST00000613788 METTL18O95568 372 aa14.88□□□□□ -0.03
CD48-203ENST00000613788 PSMB4P28070 264 aa14.88□□□□□ -0.03
CD48-203ENST00000613788 CD86P42081 329 aa14.88□□□□□ -0.03
CD48-203ENST00000613788 BCL2L1Q07817 233 aa14.88□□□□□ -0.03
CD48-203ENST00000613788 NIPAL4Q0D2K0 466 aa14.88□□□□□ -0.03
CD48-203ENST00000613788 GPS1Q13098 491 aa14.88□□□□□ -0.03
CD48-203ENST00000613788 SLC14A2Q15849 920 aa14.88□□□□□ -0.03
CD48-203ENST00000613788 FAM182AQ5T1J6 154 aa14.88□□□□□ -0.03
CD48-203ENST00000613788 Q6ZS52 159 aa14.88□□□□□ -0.03
CD48-203ENST00000613788 SYT13Q7L8C5 426 aa14.88□□□□□ -0.03
CD48-203ENST00000613788 STK40Q8N2I9 435 aa14.88□□□□□ -0.03
CD48-203ENST00000613788 CHRDQ9H2X0 955 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms