RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 PLCL1Q15111 1095 aa14.4□□□□□ -0.1
PCDHB16-201ENST00000609684 AFTPHQ6ULP2 937 aa14.4□□□□□ -0.1
PCDHB16-201ENST00000609684 DAW1Q8N136 415 aa14.4□□□□□ -0.1
PCDHB16-201ENST00000609684 OR52K2Q8NGK3 314 aa14.4□□□□□ -0.1
PCDHB16-201ENST00000609684 ZNF558Q96NG5 402 aa14.4□□□□□ -0.1
PCDHB16-201ENST00000609684 FTHL17Q9BXU8 183 aa14.4□□□□□ -0.1
PCDHB16-201ENST00000609684 MRPL17Q9NRX2 175 aaKnown RBP14.4□□□□□ -0.1
PCDHB16-201ENST00000609684 AHSPQ9NZD4 102 aa14.4□□□□□ -0.1
PCDHB16-201ENST00000609684 H3BMM5 538 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 CSH1P0DML2 217 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 CSH2P0DML3 217 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 SLC35G1Q2M3R5 365 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 LIPMQ5VYY2 423 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 POTEHQ6S545 545 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 TMEM26Q6ZUK4 368 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 EID3Q8N140 333 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 GRIN3AQ8TCU5 1115 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 HDAC10Q969S8 669 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 TDRKHQ9Y2W6 561 aaKnown RBP14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 KRT36O76013 467 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 TNFAIP8O95379 198 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 KRT8P05787 483 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 IMPDH2P12268 514 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 FKBP1BP68106 108 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 SP3Q02447 781 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 CDK18Q07002 472 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 ACSM2AQ08AH3 577 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 ACSM2BQ68CK6 577 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 IRGCQ6NXR0 463 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 MON1AQ86VX9 555 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 ITFG1Q8TB96 612 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 DLG3Q92796 817 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 MTFMTQ96DP5 389 aaKnown RBP14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 MAGED4Q96JG8 741 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 KCTD15Q96SI1 283 aaPredicted RBP14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 KRT84Q9NSB2 600 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 TCHHQ07283 1943 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 RGS5O15539 181 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 XYLBO75191 536 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 FAM155BO75949 473 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 SERPINA6P08185 405 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 GSTM1P09488 218 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 HNRNPLP14866 589 aaKnown RBP eCLIP14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 SERPINB1P30740 379 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 TTPAP49638 278 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 GALNT3Q14435 633 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 FNBP1LQ5T0N5 605 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 ISLR2Q6UXK2 745 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 NET1Q7Z628 596 aaPredicted RBP14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 RERGLQ9H628 205 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 PARP4Q9UKK3 1724 aaKnown RBP14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 TBL1XO60907 577 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 SFSWAPQ12872 951 aaKnown RBP14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 DDHD1Q8NEL9 900 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 UTP15Q8TED0 518 aaKnown RBP14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 TADA1Q96BN2 335 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 UGT2B28Q9BY64 529 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 PHACTR1Q9C0D0 580 aa14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 ZNF214Q9UL59 606 aaPredicted RBP14.39□□□□□ -0.11
PCDHB16-201ENST00000609684 FOXO6A8MYZ6 492 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 NT5C1B-RDH14C9J2C7 533 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 SNRPB2P08579 225 aaKnown RBP14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 POLR2EP19388 210 aaKnown RBP14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 FGFR3P22607 806 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 BLVRAP53004 296 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 LPCAT2Q7L5N7 544 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 SLC26A9Q7LBE3 791 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 TMEM132CQ8N3T6 1108 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 EFCAB3Q8N7B9 438 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 C12orf50Q8NA57 414 aaPredicted RBP14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 NTPCRQ9BSD7 190 aaKnown RBP14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 SLIT2O94813 1529 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 SNED1Q8TER0 1413 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 RGSL1A5PLK6 1076 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 MTA2O94776 668 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 ANXA5P08758 320 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 TPSB2P20231 275 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 SQLEQ14534 574 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 TPSAB1Q15661 275 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 TEX44Q53QW1 395 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 ZNF621Q6ZSS3 439 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 SYT12Q8IV01 421 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 SELENOMQ8WWX9 145 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 TPD52L3Q96J77 140 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 GLOD4Q9HC38 313 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 PNPOQ9NVS9 261 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 RCOR3Q9P2K3 495 aaPredicted RBP14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 ATP6AP2A0A1C7CYW4 349 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 MOXD2PA6NHM9 499 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 ZNF839A8K0R7 811 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 HS6ST1O60243 411 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 ATP6AP2O75787 350 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 BPGMP07738 259 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 CDC25CP30307 473 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 PTDSS1P48651 473 aaKnown RBP14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 GPR15P49685 360 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 FLT3LGP49771 235 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 USP4Q13107 963 aa14.38□□□□□ -0.11
PCDHB16-201ENST00000609684 SLC1A5Q15758 541 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms