RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 ATXN7L2Q5T6C5 722 aaPredicted RBP14.47□□□□□ -0.09
CTSA-219ENST00000607841 LPCAT2Q7L5N7 544 aa14.47□□□□□ -0.09
CTSA-219ENST00000607841 REXO1L1PQ8IX06 675 aa14.47□□□□□ -0.09
CTSA-219ENST00000607841 TSEN2Q8NCE0 465 aaKnown RBP14.47□□□□□ -0.09
CTSA-219ENST00000607841 GRIN3AQ8TCU5 1115 aa14.47□□□□□ -0.09
CTSA-219ENST00000607841 NKD2Q969F2 451 aaPredicted RBP14.47□□□□□ -0.09
CTSA-219ENST00000607841 TOE1Q96GM8 510 aaKnown RBP14.47□□□□□ -0.09
CTSA-219ENST00000607841 ZC3H10Q96K80 434 aaKnown RBP14.47□□□□□ -0.09
CTSA-219ENST00000607841 OLFM3Q96PB7 478 aa14.47□□□□□ -0.09
CTSA-219ENST00000607841 ZDHHC6Q9H6R6 413 aa14.47□□□□□ -0.09
CTSA-219ENST00000607841 SGK2Q9HBY8 427 aa14.47□□□□□ -0.09
CTSA-219ENST00000607841 TRMT1Q9NXH9 659 aaKnown RBP14.47□□□□□ -0.09
CTSA-219ENST00000607841 WSB2Q9NYS7 404 aaPredicted RBP14.47□□□□□ -0.09
CTSA-219ENST00000607841 LHX3Q9UBR4 397 aa14.47□□□□□ -0.09
CTSA-219ENST00000607841 AMACRQ9UHK6 382 aa14.47□□□□□ -0.09
CTSA-219ENST00000607841 SARDHQ9UL12 918 aa14.47□□□□□ -0.09
CTSA-219ENST00000607841 WASF2Q9Y6W5 498 aa14.47□□□□□ -0.09
CTSA-219ENST00000607841 APOC4-APOC2K7ER74 178 aa14.46□□□□□ -0.09
CTSA-219ENST00000607841 SLC7A4O43246 635 aa14.46□□□□□ -0.09
CTSA-219ENST00000607841 LMNAP02545 664 aaKnown RBP14.46□□□□□ -0.09
CTSA-219ENST00000607841 APOC2P02655 101 aa14.46□□□□□ -0.09
CTSA-219ENST00000607841 CTSLP07711 333 aa14.46□□□□□ -0.09
CTSA-219ENST00000607841 CCNB1P14635 433 aa14.46□□□□□ -0.09
CTSA-219ENST00000607841 RPL6Q02878 288 aaKnown RBP14.46□□□□□ -0.09
CTSA-219ENST00000607841 AP1B1Q10567 949 aa14.46□□□□□ -0.09
CTSA-219ENST00000607841 ZNF211Q13398 564 aaPredicted RBP14.46□□□□□ -0.09
CTSA-219ENST00000607841 PLK5Q496M5 336 aa14.46□□□□□ -0.09
CTSA-219ENST00000607841 RALGPS1Q5JS13 557 aa14.46□□□□□ -0.09
CTSA-219ENST00000607841 SEL1L2Q5TEA6 688 aa14.46□□□□□ -0.09
CTSA-219ENST00000607841 NPNTQ6UXI9 565 aa14.46□□□□□ -0.09
CTSA-219ENST00000607841 GDPD4Q6W3E5 623 aa14.46□□□□□ -0.09
CTSA-219ENST00000607841 FAM124AQ86V42 546 aa14.46□□□□□ -0.09
CTSA-219ENST00000607841 FAM160A2Q8N612 972 aaPredicted RBP14.46□□□□□ -0.09
CTSA-219ENST00000607841 TEX26Q8N6G2 289 aa14.46□□□□□ -0.09
CTSA-219ENST00000607841 FRMD1Q8N878 549 aa14.46□□□□□ -0.09
CTSA-219ENST00000607841 OR6K2Q8NGY2 324 aa14.46□□□□□ -0.09
CTSA-219ENST00000607841 MAML1Q92585 1016 aa14.46□□□□□ -0.09
CTSA-219ENST00000607841 EXOC2Q96KP1 924 aa14.46□□□□□ -0.09
CTSA-219ENST00000607841 TUBGCP5Q96RT8 1024 aa14.46□□□□□ -0.09
CTSA-219ENST00000607841 PHOX2BQ99453 314 aa14.46□□□□□ -0.09
CTSA-219ENST00000607841 LGMNQ99538 433 aa14.46□□□□□ -0.09
CTSA-219ENST00000607841 CPEB1Q9BZB8 566 aaKnown RBP14.46□□□□□ -0.09
CTSA-219ENST00000607841 EVLQ9UI08 416 aaPredicted RBP14.46□□□□□ -0.09
CTSA-219ENST00000607841 MBD1Q9UIS9 605 aaPredicted RBP14.46□□□□□ -0.09
CTSA-219ENST00000607841 JRKLQ9Y4A0 524 aa14.46□□□□□ -0.09
CTSA-219ENST00000607841 MYO18AQ92614 2054 aaKnown RBP14.46□□□□□ -0.09
CTSA-219ENST00000607841 HACD1B0YJ81 288 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 MTSS1O43312 755 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 BCKDHBP21953 392 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 CES1P23141 567 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 ITGB7P26010 798 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 SCNN1BP51168 640 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 AP1S1P61966 158 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 ADCY2Q08462 1091 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 XRCC4Q13426 336 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 ZNF805Q5CZA5 627 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 PMS2CLQ68D20 193 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.45□□□□□ -0.1
CTSA-219ENST00000607841 SRLQ86TD4 932 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 AADATQ8N5Z0 425 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 TTC13Q8NBP0 860 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 CADM4Q8NFZ8 388 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 HCAR2Q8TDS4 363 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 TFB1MQ8WVM0 346 aaKnown RBP14.45□□□□□ -0.1
CTSA-219ENST00000607841 FOXJ1Q92949 421 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 LOXL4Q96JB6 756 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 ZNF641Q96N77 438 aaPredicted RBP14.45□□□□□ -0.1
CTSA-219ENST00000607841 FERMT1Q9BQL6 677 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 MGME1Q9BQP7 344 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 HDAC8Q9BY41 377 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 POLR1EQ9GZS1 481 aaKnown RBP14.45□□□□□ -0.1
CTSA-219ENST00000607841 PCED1AQ9H1Q7 454 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 DUSP15Q9H1R2 295 aaPredicted RBP14.45□□□□□ -0.1
CTSA-219ENST00000607841 CARD9Q9H257 536 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 NEUROG2Q9H2A3 272 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 KDM4CQ9H3R0 1056 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 ATP13A3Q9H7F0 1226 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 CD93Q9NPY3 652 aa14.45□□□□□ -0.1
CTSA-219ENST00000607841 RBM22Q9NW64 420 aaKnown RBP eCLIP14.45□□□□□ -0.1
CTSA-219ENST00000607841 SAE1Q9UBE0 346 aaPredicted RBP14.45□□□□□ -0.1
CTSA-219ENST00000607841 SMG5Q9UPR3 1016 aaKnown RBP14.45□□□□□ -0.1
CTSA-219ENST00000607841 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.44□□□□□ -0.1
CTSA-219ENST00000607841 LRRC72A6NJI9 287 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 KCNK3O14649 394 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 ZNF189O75820 626 aaPredicted RBP14.44□□□□□ -0.1
CTSA-219ENST00000607841 SEMA4FO95754 770 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 UGT2B4P06133 528 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 PECAM1P16284 738 aaPredicted RBP14.44□□□□□ -0.1
CTSA-219ENST00000607841 SERPINA4P29622 427 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 GKP32189 559 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 DRD3P35462 400 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 NEK3P51956 506 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 IFI35P80217 286 aaPredicted RBP14.44□□□□□ -0.1
CTSA-219ENST00000607841 BCL2L1Q07817 233 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 ITKQ08881 620 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 CNTN1Q12860 1018 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 POM121L1PQ3SYA9 428 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 ZNF569Q5MCW4 686 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 CFAP58Q5T655 872 aa14.44□□□□□ -0.1
CTSA-219ENST00000607841 LAIR1Q6GTX8 287 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms