RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 SASS6Q6UVJ0 657 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 LEKR1Q6ZMV7 388 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 SLFN11Q7Z7L1 901 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 PDZD3Q86UT5 571 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 DCP2Q8IU60 420 aaKnown RBP7.75□□□□□ -1.17
CUX1-219ENST00000606749 SLC22A18ASQ8N1D0 253 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 PYROXD2Q8N2H3 581 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 C3orf20Q8ND61 904 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 NEK11Q8NG66 645 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 OR4C6Q8NH72 309 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 FAM172AQ8WUF8 416 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 RFFLQ8WZ73 363 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 TBC1D31Q96DN5 1066 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 LRIG1Q96JA1 1093 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 PCMTD1Q96MG8 357 aaPredicted RBP7.75□□□□□ -1.17
CUX1-219ENST00000606749 LENG8Q96PV6 779 aaPredicted RBP7.75□□□□□ -1.17
CUX1-219ENST00000606749 ERGIC2Q96RQ1 377 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 KLF6Q99612 283 aaPredicted RBP7.75□□□□□ -1.17
CUX1-219ENST00000606749 SELENOOQ9BVL4 669 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 C1QTNF2Q9BXJ5 285 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 CALN1Q9BXU9 219 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 TM6SF2Q9BZW4 377 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 NRSN2Q9GZP1 204 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 NOL6Q9H6R4 1146 aaKnown RBP7.75□□□□□ -1.17
CUX1-219ENST00000606749 ZDHHC6Q9H6R6 413 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 GPR27Q9NS67 375 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 NEU3Q9UQ49 428 aa7.75□□□□□ -1.17
CUX1-219ENST00000606749 SPTY2D1-AS1A0A0U1RR47 76 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 NEMP2A6NFY4 417 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 C16orf96A6NNT2 1141 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 A6NNZ2 444 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 KRIT1O00522 736 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 SCAMP1O15126 338 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 FFAR2O15552 330 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 BUB1O43683 1085 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 RAMP2O60895 175 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 GSRP00390 522 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 CALB1P05937 261 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 CKMT1AP12532 417 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 CDK11BP21127 795 aaKnown RBP7.74□□□□□ -1.17
CUX1-219ENST00000606749 GPD1P21695 349 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 RABIFP47224 123 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 ZNF143P52747 638 aaPredicted RBP7.74□□□□□ -1.17
CUX1-219ENST00000606749 SNRPD1P62314 119 aaKnown RBP7.74□□□□□ -1.17
CUX1-219ENST00000606749 RPL7AP62424 266 aaKnown RBP7.74□□□□□ -1.17
CUX1-219ENST00000606749 INSM1Q01101 510 aaPredicted RBP7.74□□□□□ -1.17
CUX1-219ENST00000606749 MYL5Q02045 173 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 SEMG2Q02383 582 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 FZD2Q14332 565 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 RTP5Q14D33 572 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 NCAPHQ15003 741 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 HS1BP3Q53T59 392 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 ZNF542PQ5EBM4 170 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 ATXN7L2Q5T6C5 722 aaPredicted RBP7.74□□□□□ -1.17
CUX1-219ENST00000606749 SCYL2Q6P3W7 929 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 MON1BQ7L1V2 547 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 PARS2Q7L3T8 475 aaKnown RBP7.74□□□□□ -1.17
CUX1-219ENST00000606749 APTXQ7Z2E3 356 aaKnown RBP7.74□□□□□ -1.17
CUX1-219ENST00000606749 PTAR1Q7Z6K3 402 aaPredicted RBP7.74□□□□□ -1.17
CUX1-219ENST00000606749 TTC7BQ86TV6 843 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 ZSCAN30Q86W11 494 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 RYBPQ8N488 228 aaPredicted RBP7.74□□□□□ -1.17
CUX1-219ENST00000606749 FAM181AQ8N9Y4 354 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 ANKRD20A12PQ8NF67 263 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 OR2AP1Q8NGE2 309 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 OR6K2Q8NGY2 324 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 ASB12Q8WXK4 309 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 NTAN1Q96AB6 310 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 RAB7BQ96AH8 199 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 CENPTQ96BT3 561 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 NXPE2Q96DL1 559 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 KLHL32Q96NJ5 620 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 AGPAT1Q99943 283 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 KLC2Q9H0B6 622 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 HSD3B7Q9H2F3 369 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 SEPT11Q9NVA2 429 aaKnown RBP7.74□□□□□ -1.17
CUX1-219ENST00000606749 ANO10Q9NW15 660 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 DNAJC28Q9NX36 388 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 NLGN3Q9NZ94 848 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 KLF15Q9UIH9 416 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 FZD10Q9ULW2 581 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 CLCA2Q9UQC9 943 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 AK5Q9Y6K8 562 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 CELSR3Q9NYQ7 3312 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 TRPM6Q9BX84 2022 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 LOC400499M0QZD8 3231 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 LAMA5O15230 3695 aa7.74□□□□□ -1.17
CUX1-219ENST00000606749 TDRD6O60522 2096 aaKnown RBP7.74□□□□□ -1.17
CUX1-219ENST00000606749 LY6G6EA0A0G2JKS1 128 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 ZSCAN5CA6NGD5 496 aaPredicted RBP7.73□□□□□ -1.17
CUX1-219ENST00000606749 WASH4PA8MWX3 477 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 K7ESM1 405 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 NEMP1O14524 444 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 FPGTO14772 594 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 AREL1O15033 823 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 SPINT1O43278 529 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 CCP110O43303 1012 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 TLX3O43711 291 aaPredicted RBP7.73□□□□□ -1.17
CUX1-219ENST00000606749 CREB3O43889 395 aa7.73□□□□□ -1.17
CUX1-219ENST00000606749 TMCC1O94876 653 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms