RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 LGMNQ99538 433 aa14.08□□□□□ -0.16
RNF40-212ENST00000602784 TLR10Q9BXR5 811 aa14.08□□□□□ -0.16
RNF40-212ENST00000602784 HDAC8Q9BY41 377 aa14.08□□□□□ -0.16
RNF40-212ENST00000602784 PCED1AQ9H1Q7 454 aa14.08□□□□□ -0.16
RNF40-212ENST00000602784 CARD9Q9H257 536 aa14.08□□□□□ -0.16
RNF40-212ENST00000602784 SGK2Q9HBY8 427 aa14.08□□□□□ -0.16
RNF40-212ENST00000602784 KCND1Q9NSA2 647 aa14.08□□□□□ -0.16
RNF40-212ENST00000602784 TRMT1Q9NXH9 659 aaKnown RBP14.08□□□□□ -0.16
RNF40-212ENST00000602784 FBXL12Q9NXK8 326 aa14.08□□□□□ -0.16
RNF40-212ENST00000602784 WSB2Q9NYS7 404 aaPredicted RBP14.08□□□□□ -0.16
RNF40-212ENST00000602784 MBD1Q9UIS9 605 aaPredicted RBP14.08□□□□□ -0.16
RNF40-212ENST00000602784 CYP8B1Q9UNU6 501 aa14.08□□□□□ -0.16
RNF40-212ENST00000602784 JRKLQ9Y4A0 524 aa14.08□□□□□ -0.16
RNF40-212ENST00000602784 HACD1B0YJ81 288 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 KRIT1O00522 736 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 SLC7A4O43246 635 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 MAP3K13O43283 966 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 MTSS1O43312 755 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 KIF5CO60282 957 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 RHOBTB1O94844 696 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 PECAM1P16284 738 aaPredicted RBP14.07□□□□□ -0.16
RNF40-212ENST00000602784 CES1P23141 567 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 DRD3P35462 400 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 IFI35P80217 286 aaPredicted RBP14.07□□□□□ -0.16
RNF40-212ENST00000602784 SRSF5Q13243 272 aaKnown RBP14.07□□□□□ -0.16
RNF40-212ENST00000602784 ZNF211Q13398 564 aaPredicted RBP14.07□□□□□ -0.16
RNF40-212ENST00000602784 ZNF235Q14590 738 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 LLGL1Q15334 1064 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 ELF2Q15723 593 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 PLK5Q496M5 336 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 ATXN7L2Q5T6C5 722 aaPredicted RBP14.07□□□□□ -0.16
RNF40-212ENST00000602784 CCDC181Q5TID7 509 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 ALG1LQ6GMV1 187 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 NPNTQ6UXI9 565 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 SRLQ86TD4 932 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 RYBPQ8N488 228 aaPredicted RBP14.07□□□□□ -0.16
RNF40-212ENST00000602784 HDDC3Q8N4P3 179 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 FAM160A2Q8N612 972 aaPredicted RBP14.07□□□□□ -0.16
RNF40-212ENST00000602784 CADM4Q8NFZ8 388 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 GRIN3AQ8TCU5 1115 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 TOE1Q96GM8 510 aaKnown RBP14.07□□□□□ -0.16
RNF40-212ENST00000602784 PPP1R16AQ96I34 528 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 LOXL4Q96JB6 756 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 ZNF641Q96N77 438 aaPredicted RBP14.07□□□□□ -0.16
RNF40-212ENST00000602784 OMDQ99983 421 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 MGME1Q9BQP7 344 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 HERPUD2Q9BSE4 406 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 DUSP15Q9H1R2 295 aaPredicted RBP14.07□□□□□ -0.16
RNF40-212ENST00000602784 KDM4CQ9H3R0 1056 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 ZDHHC6Q9H6R6 413 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 FAM86C1Q9NVL1 165 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 SAE1Q9UBE0 346 aaPredicted RBP14.07□□□□□ -0.16
RNF40-212ENST00000602784 RAPGEFL1Q9UHV5 662 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 PYCARDQ9ULZ3 195 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 INVSQ9Y283 1065 aa14.07□□□□□ -0.16
RNF40-212ENST00000602784 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.07□□□□□ -0.16
RNF40-212ENST00000602784 A0A1W2PP55 124 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 KPNA3O00505 521 aaPredicted RBP14.06□□□□□ -0.16
RNF40-212ENST00000602784 MUSKO15146 869 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 RNASEH2AO75792 299 aaKnown RBP14.06□□□□□ -0.16
RNF40-212ENST00000602784 ZNF189O75820 626 aaPredicted RBP14.06□□□□□ -0.16
RNF40-212ENST00000602784 CR2P20023 1033 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 BCKDHBP21953 392 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 ITGB7P26010 798 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 AP1S1P61966 158 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 KLF1Q13351 362 aaPredicted RBP14.06□□□□□ -0.16
RNF40-212ENST00000602784 PRKD1Q15139 912 aaPredicted RBP14.06□□□□□ -0.16
RNF40-212ENST00000602784 ZNF805Q5CZA5 627 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 AADACL2Q6P093 401 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 GDPD4Q6W3E5 623 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 LPCAT2Q7L5N7 544 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 CACUL1Q86Y37 369 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 FRMD1Q8N878 549 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 SUMF1Q8NBK3 374 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 TTC13Q8NBP0 860 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 GANCQ8TET4 914 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 TFB1MQ8WVM0 346 aaKnown RBP14.06□□□□□ -0.16
RNF40-212ENST00000602784 NUDCD1Q96RS6 583 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 IL12RB2Q99665 862 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 BTBD1Q9H0C5 482 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 NEUROG2Q9H2A3 272 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 CD93Q9NPY3 652 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 DYRK4Q9NR20 520 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 RBM22Q9NW64 420 aaKnown RBP eCLIP14.06□□□□□ -0.16
RNF40-212ENST00000602784 DKK3Q9UBP4 350 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 EVLQ9UI08 416 aaPredicted RBP14.06□□□□□ -0.16
RNF40-212ENST00000602784 RAB23Q9ULC3 237 aa14.06□□□□□ -0.16
RNF40-212ENST00000602784 SHROOM3Q8TF72 1996 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 SPAG17Q6Q759 2223 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.05□□□□□ -0.16
RNF40-212ENST00000602784 KCNK3O14649 394 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 NDUFS2O75306 463 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 LMNAP02545 664 aaKnown RBP14.05□□□□□ -0.16
RNF40-212ENST00000602784 RGRP47804 291 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 SCNN1BP51168 640 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 SUOXP51687 545 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 METAP1P53582 386 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 RPL6Q02878 288 aaKnown RBP14.05□□□□□ -0.16
RNF40-212ENST00000602784 AP1B1Q10567 949 aa14.05□□□□□ -0.16
RNF40-212ENST00000602784 CNTN1Q12860 1018 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms