RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 FFAR2O15552 330 aa17.28■□□□□ 0.36
SCAF1-204ENST00000601038 TSPAN6O43657 245 aa17.28■□□□□ 0.36
SCAF1-204ENST00000601038 GJB6O95452 261 aa17.28■□□□□ 0.36
SCAF1-204ENST00000601038 POP4O95707 220 aaKnown RBP17.28■□□□□ 0.36
SCAF1-204ENST00000601038 GIMD1P0DJR0 217 aa17.28■□□□□ 0.36
SCAF1-204ENST00000601038 RFC1P35251 1148 aaPredicted RBP17.28■□□□□ 0.36
SCAF1-204ENST00000601038 SNRPD1P62314 119 aaKnown RBP17.28■□□□□ 0.36
SCAF1-204ENST00000601038 DAB2P98082 770 aa17.28■□□□□ 0.36
SCAF1-204ENST00000601038 SGCGQ13326 291 aa17.28■□□□□ 0.36
SCAF1-204ENST00000601038 POLD3Q15054 466 aaPredicted RBP17.28■□□□□ 0.36
SCAF1-204ENST00000601038 ZNF805Q5CZA5 627 aa17.28■□□□□ 0.36
SCAF1-204ENST00000601038 KYAT3Q6YP21 454 aaKnown RBP17.28■□□□□ 0.36
SCAF1-204ENST00000601038 RBM43Q6ZSC3 357 aaKnown RBP17.28■□□□□ 0.36
SCAF1-204ENST00000601038 PARS2Q7L3T8 475 aaKnown RBP17.28■□□□□ 0.36
SCAF1-204ENST00000601038 PHF13Q86YI8 300 aaPredicted RBP17.28■□□□□ 0.36
SCAF1-204ENST00000601038 CCDC185Q8N715 623 aa17.28■□□□□ 0.36
SCAF1-204ENST00000601038 DCBLD1Q8N8Z6 715 aa17.28■□□□□ 0.36
SCAF1-204ENST00000601038 OR2AP1Q8NGE2 309 aa17.28■□□□□ 0.36
SCAF1-204ENST00000601038 FAM172AQ8WUF8 416 aa17.28■□□□□ 0.36
SCAF1-204ENST00000601038 NTAN1Q96AB6 310 aa17.28■□□□□ 0.36
SCAF1-204ENST00000601038 TBC1D31Q96DN5 1066 aa17.28■□□□□ 0.36
SCAF1-204ENST00000601038 LENG8Q96PV6 779 aaPredicted RBP17.28■□□□□ 0.36
SCAF1-204ENST00000601038 C1QTNF2Q9BXJ5 285 aa17.28■□□□□ 0.36
SCAF1-204ENST00000601038 NLGN3Q9NZ94 848 aa17.28■□□□□ 0.36
SCAF1-204ENST00000601038 ADAM22Q9P0K1 906 aa17.28■□□□□ 0.36
SCAF1-204ENST00000601038 NEU3Q9UQ49 428 aa17.28■□□□□ 0.36
SCAF1-204ENST00000601038 SPTY2D1-AS1A0A0U1RR47 76 aa17.27■□□□□ 0.36
SCAF1-204ENST00000601038 C16orf96A6NNT2 1141 aa17.27■□□□□ 0.36
SCAF1-204ENST00000601038 SCAMP1O15126 338 aa17.27■□□□□ 0.36
SCAF1-204ENST00000601038 RAD51BO15315 384 aa17.27■□□□□ 0.36
SCAF1-204ENST00000601038 KDELR3O43731 214 aa17.27■□□□□ 0.36
SCAF1-204ENST00000601038 RAMP2O60895 175 aa17.27■□□□□ 0.36
SCAF1-204ENST00000601038 GSRP00390 522 aa17.27■□□□□ 0.36
SCAF1-204ENST00000601038 ALPPL2P10696 532 aa17.27■□□□□ 0.36
SCAF1-204ENST00000601038 CKMT1AP12532 417 aa17.27■□□□□ 0.36
SCAF1-204ENST00000601038 HNRNPKP61978 463 aaKnown RBP eCLIP17.27■□□□□ 0.36
SCAF1-204ENST00000601038 SEMG2Q02383 582 aa17.27■□□□□ 0.36
SCAF1-204ENST00000601038 FZD2Q14332 565 aa17.27■□□□□ 0.36
SCAF1-204ENST00000601038 SYCP1Q15431 976 aa17.27■□□□□ 0.36
SCAF1-204ENST00000601038 CLEC16AQ2KHT3 1053 aa17.27■□□□□ 0.36
SCAF1-204ENST00000601038 MYLK3Q32MK0 819 aa17.27■□□□□ 0.36
SCAF1-204ENST00000601038 SOWAHCQ53LP3 525 aaPredicted RBP17.27■□□□□ 0.36
SCAF1-204ENST00000601038 WDR59Q6PJI9 974 aa17.27■□□□□ 0.36
SCAF1-204ENST00000601038 PTAR1Q7Z6K3 402 aaPredicted RBP17.27■□□□□ 0.36
SCAF1-204ENST00000601038 RYBPQ8N488 228 aaPredicted RBP17.27■□□□□ 0.36
SCAF1-204ENST00000601038 C3orf20Q8ND61 904 aa17.27■□□□□ 0.36
SCAF1-204ENST00000601038 ASB12Q8WXK4 309 aa17.27■□□□□ 0.36
SCAF1-204ENST00000601038 DCBLD2Q96PD2 775 aa17.27■□□□□ 0.36
SCAF1-204ENST00000601038 KLF6Q99612 283 aaPredicted RBP17.27■□□□□ 0.36
SCAF1-204ENST00000601038 SELENOOQ9BVL4 669 aa17.27■□□□□ 0.36
SCAF1-204ENST00000601038 DNAJC28Q9NX36 388 aa17.27■□□□□ 0.36
SCAF1-204ENST00000601038 ZSCAN5CA6NGD5 496 aaPredicted RBP17.26■□□□□ 0.35
SCAF1-204ENST00000601038 IGLON5A6NGN9 336 aa17.26■□□□□ 0.35
SCAF1-204ENST00000601038 LRRC10BA6NIK2 292 aa17.26■□□□□ 0.35
SCAF1-204ENST00000601038 SIGLEC16A6NMB1 481 aa17.26■□□□□ 0.35
SCAF1-204ENST00000601038 KRIT1O00522 736 aa17.26■□□□□ 0.35
SCAF1-204ENST00000601038 NEMP1O14524 444 aa17.26■□□□□ 0.35
SCAF1-204ENST00000601038 MT-CO3P00414 261 aa17.26■□□□□ 0.35
SCAF1-204ENST00000601038 CALB1P05937 261 aa17.26■□□□□ 0.35
SCAF1-204ENST00000601038 GPD1P21695 349 aa17.26■□□□□ 0.35
SCAF1-204ENST00000601038 GKP32189 559 aa17.26■□□□□ 0.35
SCAF1-204ENST00000601038 EIF2S3P41091 472 aaKnown RBP17.26■□□□□ 0.35
SCAF1-204ENST00000601038 ABL2P42684 1182 aa17.26■□□□□ 0.35
SCAF1-204ENST00000601038 RABIFP47224 123 aa17.26■□□□□ 0.35
SCAF1-204ENST00000601038 COPB1P53618 953 aaKnown RBP17.26■□□□□ 0.35
SCAF1-204ENST00000601038 ZNF542PQ5EBM4 170 aa17.26■□□□□ 0.35
SCAF1-204ENST00000601038 SLFN11Q7Z7L1 901 aa17.26■□□□□ 0.35
SCAF1-204ENST00000601038 FAM181AQ8N9Y4 354 aa17.26■□□□□ 0.35
SCAF1-204ENST00000601038 ANKRD20A12PQ8NF67 263 aa17.26■□□□□ 0.35
SCAF1-204ENST00000601038 NEK11Q8NG66 645 aa17.26■□□□□ 0.35
SCAF1-204ENST00000601038 OR6K2Q8NGY2 324 aa17.26■□□□□ 0.35
SCAF1-204ENST00000601038 VOPP1Q96AW1 172 aa17.26■□□□□ 0.35
SCAF1-204ENST00000601038 ARHGEF26Q96DR7 871 aa17.26■□□□□ 0.35
SCAF1-204ENST00000601038 DUSP23Q9BVJ7 150 aa17.26■□□□□ 0.35
SCAF1-204ENST00000601038 OSBPL1AQ9BXW6 950 aa17.26■□□□□ 0.35
SCAF1-204ENST00000601038 CAAP1Q9H8G2 361 aa17.26■□□□□ 0.35
SCAF1-204ENST00000601038 LIMA1Q9UHB6 759 aaKnown RBP17.26■□□□□ 0.35
SCAF1-204ENST00000601038 ASXL3Q9C0F0 2248 aa17.25■□□□□ 0.35
SCAF1-204ENST00000601038 ATRXP46100 2492 aa17.25■□□□□ 0.35
SCAF1-204ENST00000601038 LGALS16A8MUM7 142 aa17.25■□□□□ 0.35
SCAF1-204ENST00000601038 K7ESM1 405 aa17.25■□□□□ 0.35
SCAF1-204ENST00000601038 FPGTO14772 594 aa17.25■□□□□ 0.35
SCAF1-204ENST00000601038 TLX3O43711 291 aaPredicted RBP17.25■□□□□ 0.35
SCAF1-204ENST00000601038 CSF2P04141 144 aa17.25■□□□□ 0.35
SCAF1-204ENST00000601038 UGT2B4P06133 528 aa17.25■□□□□ 0.35
SCAF1-204ENST00000601038 NME1P15531 152 aaKnown RBP17.25■□□□□ 0.35
SCAF1-204ENST00000601038 ABCG1P45844 678 aa17.25■□□□□ 0.35
SCAF1-204ENST00000601038 TMC6Q7Z403 805 aa17.25■□□□□ 0.35
SCAF1-204ENST00000601038 PARGQ86W56 976 aa17.25■□□□□ 0.35
SCAF1-204ENST00000601038 RTL3Q8N8U3 475 aaKnown RBP17.25■□□□□ 0.35
SCAF1-204ENST00000601038 APOLD1Q96LR9 279 aa17.25■□□□□ 0.35
SCAF1-204ENST00000601038 PCMTD1Q96MG8 357 aaPredicted RBP17.25■□□□□ 0.35
SCAF1-204ENST00000601038 USP29Q9HBJ7 922 aa17.25■□□□□ 0.35
SCAF1-204ENST00000601038 EVA1BQ9NVM1 165 aa17.25■□□□□ 0.35
SCAF1-204ENST00000601038 IPO11Q9UI26 975 aaKnown RBP17.25■□□□□ 0.35
SCAF1-204ENST00000601038 CSNK1G3Q9Y6M4 447 aa17.25■□□□□ 0.35
SCAF1-204ENST00000601038 TCRBV5S1A1TA0A578 114 aa17.24■□□□□ 0.35
SCAF1-204ENST00000601038 H3BM21 787 aa17.24■□□□□ 0.35
SCAF1-204ENST00000601038 AREL1O15033 823 aa17.24■□□□□ 0.35
SCAF1-204ENST00000601038 BUB1O43683 1085 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms